Ciona intestinalis (yellow sea squirt): 100184619
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Entry
100184619 CDS
T01056
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
KO
K09662
N-acetylglucosaminyltransferase 3, mucin type [EC:2.4.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00512
Mucin type O-glycan biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
100184619
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100184619
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100184619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
Exop_C
Motif
Other DBs
NCBI-GeneID:
100184619
NCBI-ProteinID:
XP_002130928
LinkDB
All DBs
Position
8:complement(3673058..3678095)
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AA seq
509 aa
AA seq
DB search
MALGINGNQVCSFIECDFCLNSRNRRGVKFLTRCFYVTLSLWIFGSLLLMMVKEDNTTTH
KQIEKKEKERNVFEQFNKLRPTEGNDYEATMNLNIPAHRNTTHHENNFEEFRIEPNPLLP
YLDCKGVLEGRDEAIVAARLKSLELKSKLFEDRRNQFENFGGSLIQLADNCTRFKRERNY
VTSALTTEESNYPIAYILTVHTNIAAMERLLRAIYRPQNIYCVHVDRKSSQEFQASVRKI
SGCFQNVFVPSNLTEVHYTHWSRVQADLNCMHNLIDRKEQVQWRYVINLCGAEFPLKTNF
EVVRSLKNLYGYNSMESVIPPPHKTKRYEYHFVLPDTQGDYVVMDKTNIKKEPSPLDIPM
FIGSAYYVLKRQAVEFIMTDSEVQKFFKWNKDTYSPDEHMWATLQRYYPRLPGSFPPHVK
YDQNELQTITKLVKWGGLDTLVYPKCSGVYSRGICMLGVGDLSWLLQQHHLFANKFDSHI
DPYAIECLDIFLRNKTISQAVKYNSVGFI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttggtatcaatggtaaccaagtttgttcgtttattgaatgtgacttttgtcta
aacagccgaaatcgtcgtggagtgaaattcttaacgcgttgtttttacgtgacgttgtcg
ctatggatatttggttctttattattaatgatggtaaaagaagacaacactactacccac
aaacaaatcgaaaaaaaggaaaaagaacggaacgtttttgaacaattcaataagttacga
ccaaccgaaggaaatgattatgaagctacaatgaatttaaacatacccgcccacagaaac
acaacacaccatgaaaacaactttgaagaattcagaatcgagccaaatccattgctccca
tatttggattgcaaaggcgtattggaaggaagagacgaagcaatcgttgccgctagacta
aaatccttagagctaaagtcaaagctattcgaagatcgacgtaatcagttcgaaaacttt
ggtggaagtttaatacaacttgctgacaactgcacgcgattcaaacgagaaaggaattac
gtcacatccgctcttacaacagaagaatcgaattacccgattgcttatattttaactgta
catacaaacattgctgctatggaacggttgctgcgtgcaatataccgcccccagaacata
tactgcgtacacgttgatcgaaaatcttcgcaagagtttcaagccagtgttcggaaaatt
tcaggatgtttccaaaatgtgttcgttccgagtaatttaactgaggttcattatacgcac
tggagccgtgttcaagcggatctaaattgtatgcacaatttgattgacagaaaggagcaa
gttcaatggaggtatgtaatcaatctgtgtggggcagagttcccacttaaaaccaacttc
gaagtggtaagaagtttaaaaaacttgtatggatacaatagcatggagtctgtcattccc
ccaccccataaaacgaaaagatacgaataccactttgtgcttcccgacacgcaaggcgat
tatgtcgtaatggataaaactaacataaaaaaggaaccgtcaccgttggatattcccatg
ttcattggaagtgcttattatgtattaaaacgtcaggcagtagagtttattatgacagat
tcagaggttcagaaattctttaaatggaacaaagacacttactcaccagatgagcatatg
tgggcaacactgcaaagatactacccaagattacctggtagttttccacctcatgtcaag
tatgaccaaaatgaattacagaccattacgaaacttgtaaagtggggtgggcttgataca
ttggtctatcctaaatgctctggtgtttatagcaggggaatctgtatgttgggagttgga
gacctgagttggttgttgcaacagcatcatttatttgctaataagtttgatagtcatata
gatccttatgcaattgaatgtttggatatttttttaagaaataaaactataagtcaagca
gtaaagtacaactctgttggttttatataa
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