Ciona intestinalis (yellow sea squirt): 100184638
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Entry
100184638 CDS
T01056
Name
(RefSeq) sorting nexin-33-like
KO
K17923
sorting nexin-9/18/33
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184638
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100184638
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
100184638
Macropinocytosis
Sorting nexins
100184638
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100184638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
100184638
NCBI-ProteinID:
XP_002127441
UniProt:
F6X3V2
LinkDB
All DBs
Position
1:complement(5529177..5536295)
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AA seq
566 aa
AA seq
DB search
MADQAKVLYDFNGLSENGEVTLYEGEIVTVVNKNIGDGWWEGEASGGRKGLFPEAYVQLT
PANNHAVASTPRYSNVPGENYESQLNYDNSPVAAASAPQFALPVSTGQNNYNNEDDDAWS
EDWDDNSSVATTVVPTMPGSSKQYGREAHDVASLNSVESKSSRVSGSVSKNFNRFSSFVK
HGGESYMLGKADARVRQVDQIQIIMGEEGPAWKPYDHKYSCSIENPKQQSKMKGLKKFVC
YNLTPSDTAVTVQRRYKHFDWLYARLVERYPMVAIPRLPDKQASGRFEEEFIEGRMARLK
LWISYICQHPVLSRAQIFRNFLTLTEQKAWKMSKRQAEKDDLVAANFFLTVALPVTVTTV
TDSEGPLDQFKKFTRSMDDSVSNITSCAQSMASKHYGLFKREYQSYGKSITSLSTVFNMH
QTTNNKSLTNAIKHTGQTYHRIGDMFANQPKHDLIPFIDSLWLYKGLLDTMPDVWHMQTG
AMRKLRECRKLKDEGRMTDVECGAVAERADRVVCCMRAEMDHFHGQRIRDFAAAQREMLQ
NQAQFFENIAAELRTALLQFDEVLDS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaagcaaaggtgttgtacgactttaacggccttagtgaaaatggcgaagtt
actttatatgagggtgagattgtcacagtggtaaacaagaacattggtgatggttggtgg
gagggtgaggcttcagggggaagaaaaggactttttcctgaagcttatgttcaactgaca
ccagcaaacaaccatgcagtggcctccacgccacgttatagcaatgttcctggtgagaat
tatgagagccaactgaattatgataattcacctgtagcagcagcgagcgctcctcagttt
gctcttcccgtctccacaggacaaaataattacaacaatgaagatgatgacgcttggtcc
gaggattgggatgacaactcatcagttgcaacaactgttgtaccaacaatgccaggatcc
tcaaaacaatatggccgagaagctcatgatgtggcttcacttaattcagtggaaagcaaa
tcatcacgtgttagtggctctgtgagcaagaattttaaccgattttcttcattcgttaaa
catggaggggaaagttacatgctcggtaaagcagatgctagagttcgacaagttgaccag
atccaaataataatgggtgaagaaggtcctgcatggaagccatacgatcataaatactcg
tgctcgatagaaaacccaaagcaacaaagcaaaatgaaaggcttgaaaaagtttgtatgc
tacaaccttacgccaagtgacactgctgtaacagtacaacgtcgctataaacattttgac
tggctgtatgcaaggctggtggaaaggtatcccatggtagccatacctcgcctaccagac
aaacaagcttcagggaggtttgaagaggaatttattgaaggaaggatggctaggttgaaa
ctatggatcagttacatctgccaacatccagtcctatcccgtgctcagatcttccgaaac
ttcctcactttaactgagcaaaaagcttggaagatgagcaagaggcaagccgagaaagat
gatcttgtggctgccaacttcttcctcactgtcgctcttcctgtaaccgtgacaacagtg
accgactctgaaggtccacttgatcaattcaaaaagttcactagatcaatggacgacagt
gtatcaaacataacgtcgtgtgctcagagtatggcaagcaaacactatggcttgtttaaa
cgggagtaccaatcctatggaaaatccatcacctccttgtcaactgtgttcaatatgcac
caaaccactaataataagagtttgacaaacgcaatcaaacacacaggtcaaacgtatcac
cgcattggagacatgttcgccaaccaaccaaaacatgacttgattcccttcattgactcc
ttatggctgtacaaaggtttacttgacactatgccggacgtgtggcacatgcaaactggt
gctatgagaaaattgcgcgaatgtcgcaaactaaaagacgaaggtcgaatgacggacgtc
gagtgcggggcagtcgctgaacgagccgaccgcgttgtgtgctgcatgcgtgcagaaatg
gaccacttccacgggcagcgtatcagagatttcgccgcagctcaaagagaaatgctgcaa
aaccaggcccagtttttcgaaaacatcgccgccgagcttaggaccgcgttactgcaattc
gacgaggtattggacagctga
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