Ciona intestinalis (yellow sea squirt): 100184643
Help
Entry
100184643 CDS
T01056
Name
(RefSeq) exocyst complex component 1-like isoform X1
KO
K19983
exocyst complex component 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184643
Membrane trafficking [BR:
cin04131
]
Exocytosis
Tethering complex
Exocyst complex
100184643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec3_C-term
Sec3-PIP2_bind
Sec3_CC
MGT5A_N
Vps52_CC
Motif
Other DBs
NCBI-GeneID:
100184643
NCBI-ProteinID:
XP_026691669
LinkDB
All DBs
Position
9:626700..658421
Genome browser
AA seq
939 aa
AA seq
DB search
MTAIKHALQRDLFTPQDERLLGVVHIGKAGGKKKKAILCASVTTERPVEVFISKIKRAEK
GDTYKKQKVWHLKELKVVNGKEIGGKESTEFDLQFEKNFKWSATSVGEKHNFLSCLWKLC
HRYLPRQQKPAFSNVPQSILEVSVAGGDTTRGGSTAGVEDDSLEDYQALTEQEETDLERM
ITECEFAISDAEAFTNSLSKDLSVLDGQNIHSIMGSEAQVNSLMVLLDNALAEVSQIESR
LDEYDHMVGGIATQMGQMKNQESFIQITNKNHTRLLEQLDTLVVQLDLSKGHVKALRESD
LRTDSGIEACTSAAEALQEAMEVELPKGLSKLNAVKEQQKLFHDLRQKFAARIFEHLNNV
FVRQGSDQPGASLAKQASGLKLPKHFPYHRDLLPYRQLILWLKVADKTKYTQLSTTYTQS
LNKLYTQEIKDFMATAKQRFIQQAILDVNSGSGSLQSTSRSTLSLAVPMSGEQKSRQKTL
SKKLSSSIRNLSGSQQSLSKEKRKIFGSTQSLAVKAVGKKLRFGHKKRTLGGSRESLATS
DFELSDREKFSSTFREVLNELEPTCQDEEVFLTKFFHLNVESADTMMPGGSDDEEDDTDQ
GIASRKKYQEAQVTKEIRPANIVWRMMTEIFSVVESELLSLVAFGEDLDPLNSLNMLVVI
GQRVSQAQQVNDGSFLAKMLGNCLIEVKRNFDNFIKNKVRMVQESHVSKGKKCGILPFVQ
DFEDFVGLAESIFRDSGRRTDIDKAYSTLIWAVFETIERVSGDSQKTPAEVVMFENYHHL
LNCLSSLKIAALENEKKQVRVRYNENFNSYVTTMLGRPLEKLSNFFEGVKQVIDGGLRPE
EVGFQLKYSKQELRKCIKEYSGKEVKKGLESVYHKIVKHTSEADHMLLRVVWQDMQKEFI
RQYKDFEDLIAKCYAGSQIKLEFTIDDVLNYFSDIALAQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaataaaacacgcattacaacgtgatcttttcaccccacaagacgaacgactt
ctgggtgtcgtccatattggtaaggctggtggaaagaaaaagaaagcgattttatgcgcg
tcagtaaccactgaacgaccagtcgaagttttcatcagcaagattaaaagagcggagaaa
ggcgatacttataaaaagcaaaaggtttggcatctcaaggaacttaaagtggtgaatggg
aaagaaattgggggaaaagaatccactgaatttgaccttcagtttgagaagaacttcaaa
tggtcagccacaagtgttggggagaaacataacttcttatcatgtttgtggaagctctgc
catcggtatttaccccgccaacagaaaccagcattttctaatgttcctcaaagcatcttg
gaagtgtcggttgccgggggcgacaccacacgagggggttcaacagcaggagtcgaagat
gattccctcgaagattatcaggcattgactgaacaagaagaaaccgaccttgagcgaatg
atcactgagtgtgagtttgccatcagcgatgcagaagctttcacaaactcgctgtccaaa
gatttatcggttcttgacggacaaaacattcattcaataatgggttccgaggctcaggtg
aactcactcatggtattactggacaacgctctcgctgaagtttcccagatcgagtcacgg
ttggatgaatacgatcacatggttgggggtatagcaacgcagatgggacaaatgaaaaac
caagaatcatttattcaaatcactaacaaaaaccacacaaggttgttggagcaactcgat
accttggtggtacaactagatctctccaaaggtcatgtaaaagcacttcgggaatcggac
ttacgtaccgacagtggtatagaagcgtgtacgagcgctgctgaagctttgcaggaagct
atggaggttgaattgcccaaaggtctttcaaagctgaatgccgtaaaagaacaacagaag
ttatttcatgacttgcgacaaaagttcgctgctcgcatatttgaacatctcaataatgtc
ttcgtaagacagggcagtgatcaacctggtgcctcgttagcgaagcaagcaagtggttta
aagttacccaaacactttccctaccatagagatcttctaccttatcgacaacttatactt
tggctcaaagttgctgataaaactaaatatacgcagctgtctacgacttacactcaaagt
ttaaacaagctctatacacaagaaattaaagattttatggcaacagcaaaacaaagattc
attcaacaagccatactagatgtgaacagtggttcaggttctttacaatcaacctcacgt
tcaacgttgtcactcgctgttccaatgtccggtgaacaaaaatcaagacaaaagacatta
agcaaaaaactaagctcaagtattcgcaatttatcgggatcccaacaaagcttgtcgaaa
gaaaaacggaaaatatttggatcaacacagagtttggctgtgaaagctgtcgggaaaaag
cttcgattcgggcataagaaaagaacactaggtggaagtagagagtcattggcaacctca
gattttgaattatcagatagggagaagtttagttcgacttttcgtgaagtattaaacgaa
cttgaaccaacatgccaggatgaagaagttttcctcaccaagttcttccatcttaatgtt
gagagtgccgataccatgatgccgggagggtcagatgatgaggaagatgacacggatcaa
ggaatcgcaagtcggaagaagtatcaggaggcacaagtaacaaaggaaattcggccagcc
aacattgtgtggagaatgatgactgaaatcttctctgttgttgaatctgagttattatca
ttggtagcgtttggtgaagaccttgatccattgaattcacttaatatgttggtggttatc
ggacaaagggtttctcaagctcagcaggtcaacgatggatcgtttcttgccaagatgctc
gggaattgtttgattgaagtgaaaagaaattttgacaatttcatcaaaaacaaagtccgg
atggttcaagagagccacgttagcaaagggaagaagtgcggcatcctcccctttgttcag
gattttgaggactttgttggactcgctgaaagcatcttccgcgactctgggaggagaacg
gacatcgataaagcttacagcacccttatttgggccgtgtttgaaacaattgagagagta
tccggtgacagccagaaaacaccggcagaagttgtaatgttcgagaattatcatcattta
ctaaattgtttgtcgagtttaaagattgctgcgcttgaaaacgagaagaagcaagtccga
gttcgatacaatgaaaactttaatagttacgttacaactatgctggggaggccattggag
aaactaagtaatttcttcgaaggagtcaagcaagtaatagatggtggacttcgccccgaa
gaagtcgggtttcagcttaaatacagcaagcaagagttgcgtaaatgcatcaaggaatat
agtggtaaagaagtgaagaagggactggaatctgtttatcataaaatcgtcaaacataca
tcggaagccgaccatatgttgttaagggttgtatggcaggacatgcagaaagagtttatt
cgtcaatacaaagactttgaagatttaatcgcgaaatgttacgctggaagtcagatcaag
ttggaattcacaatcgatgacgttttgaattatttctctgacattgcattggcacagtag
DBGET
integrated database retrieval system
