Ciona intestinalis (yellow sea squirt): 100184663
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Entry
100184663 CDS
T01056
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 1
KO
K17391
insulin-like growth factor 2 mRNA-binding protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100184663
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100184663
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
RRM_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
MOEP19
RRM_5
DUF3516
DUF7477
Motif
Other DBs
NCBI-GeneID:
100184663
NCBI-ProteinID:
XP_002127946
Ensembl:
ENSCING00000004227
LinkDB
All DBs
Position
12:complement(4139990..4142983)
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AA seq
601 aa
AA seq
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MNKVYIGNLPQDVALESLCDVFASFNIELSNVVVNQKGFAFADCKDASQTDRAIECLNGY
GFGGKEMSVEHSVPRGSRSRKVQVRNIPSHLNWEELDKLLAEYGLVENCEQVSTESDTAT
VKVTYSARAEAQSAIRDLNGKSVEGSILKVTLLPDPTDASRPPRNRYGNGYGPGFNGPQQ
GGAYPNRPKNIPDLPTRMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDNPGATEK
AITINGTPEACGAAVGAILDIVRDEDRNARQAAGTWNDDDIPLKILAHNSLIGRLIGKEG
RNLKAIQEKVETKIAISNSMADMQQCNAERTIAIYGDNDRCAEAEVLLMEKLRSCYENDM
MIAQQQPHQYPGINFNQLSMFGGLQGGYGHPGMREYGMNYQGQNFRGQGYNGDQRAQMSE
TCTLYIPAESVGAMIGSKGSHIRNISRIANASIKIVPPEDGDDEKQRRVTIMGSPEGQWK
SQFCIFDKLKQEGFFNAEDERLTSEMTIPAAIVGRVIGKGGNNVRELQRLTSSEVVIPRQ
SETEGLEEVPVKICGNFFANQSAQRKIREMLMKSREAERIGKMRERQNLPVPGPGPVTVN
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggtgtatatcggcaatctaccgcaagacgtggcgcttgaatcactctgtgat
gtcttcgcctcattcaacattgagttatctaacgtcgtagtcaaccagaaaggcttcgct
tttgccgactgcaaagacgcaagtcagacggacagagccattgagtgtcttaacggatac
gggttcggcggcaaagaaatgagcgttgagcactccgtacctcgaggctcgcgtagcaga
aaggtgcaagtccgtaacatcccttctcatcttaattgggaagagttggacaagctgttg
gcggaatacggtctggtcgaaaattgcgaacaggtttcaacagaatcagacacggcaacg
gttaaagtgacatacagtgcaagagcggaggctcaatctgcaatccgtgatcttaatggc
aaatcagtagaaggaagcatccttaaagttactcttcttccggatcctacagatgcaagt
cgtccacctcgcaatcgctatggaaatggatacggaccaggattcaacggtccccagcaa
gggggagcctaccccaaccgaccaaagaacatcccagatcttccgacgaggatgttggtc
ccaagccaatacgtgggagccatcattggaaagggaggggattcgattcgagcaatcact
cagaaaactcacgcaagaattgacgttcaccgcaaagataacccgggagcaacagaaaaa
gcgatcaccatcaatggtactccagaagcgtgtggagcagctgtgggagcaattcttgac
atcgtacgcgatgaagatcgtaatgctcgtcaagcagctggaacatggaatgatgatgat
attccattgaaaattcttgcacacaactcattgattggtcgcttgattggaaaagaaggt
cgcaacttaaaggccatccaagagaaagtggaaaccaagattgcaatatcaaacagcatg
gctgatatgcaacagtgcaatgcagagcgtacaatcgcaatatatggtgacaatgatcgc
tgtgctgaagcagaagtactgctgatggagaaacttcgtagctgttatgagaatgacatg
atgattgctcagcaacaaccgcatcaatatccaggaatcaacttcaaccagttgtccatg
tttggtggtttgcagggcgggtatgggcatccagggatgcgcgagtatggcatgaactac
cagggacagaatttcagaggacaaggttacaatggagatcaacgagctcagatgagtgag
acctgcacactctatattcctgcagaatctgttggagcaatgattggaagcaaaggaagc
catattcgaaatatttcacgcatcgcaaacgcttcgattaagattgtcccaccagaagat
ggtgatgatgagaagcagagaagagtaaccatcatgggaagtccggaggggcagtggaag
tcgcaattctgcatctttgataagctgaagcaggaagggttcttcaatgctgaggatgaa
agattgacatcggagatgacgattcctgctgccattgtgggacgtgtgattggaaaaggt
gggaacaacgttcgtgaacttcagcgtctcaccagctcagaggttgtcattccacgacaa
tctgaaaccgaaggattggaggaagttccggttaagatttgtggaaattttttcgcaaat
caatcggctcagaggaagatcagagagatgttgatgaagtccagagaggcagaacgtatt
ggaaagatgcgcgaacgccagaatctaccagttcctggacccggaccagttacagtcaac
aactag
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