Ciona intestinalis (yellow sea squirt): 100184673
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Entry
100184673 CDS
T01056
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100184673
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
100184673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
NACHT
Fer4_10
Fer4_6
AAA_29
nSTAND3
RsgA_GTPase
Fer4_2
AAA_16
AAA_15
LdpA_Fe-S-bd
AAA_23
Fer4_21
nSTAND_NTPase5
TsaE
AAA_30
Fer4_4
SRP54
Fer4_7
Fer4_9
Fer4_16
ORC-CDC6-like
AAA_7
Fer4_8
Fer4_17
AAA_31
Motif
Other DBs
NCBI-GeneID:
100184673
NCBI-ProteinID:
XP_002121964
Ensembl:
ENSCING00000001553
UniProt:
F6XZ43
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MSDSNTRIAIVNNDKCKPKRCRQECRKSCPVVRMGKLCIEVTPLSKLAWISEELCIGCGI
CVKKCPFEAISIINLPSNLEKDTTHRYSANSFKLHRLPIPRAGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGSYDEPPDWTEILSYFRGSELQNYFTKILEDDMKAVIKPQYVDQIPKAV
KGTVQAMLDRKDDSGTQEEFCGLLDLNHVLTRKIEDLSGGELQRFAIAVVCIQKADVYMF
DEPSSYLDVKQRLNAAVAIRNLLGTTNYVIVVEHDLSVLDYLSDFICCLYGVPGAYGVVT
MPSSVREGINIFLDGFVPSENLRFRDSSLVFKVSETAEGEEDVKKMCRYSYGDMMKKLGD
FELTVKGGEFTDSEIVVMLGENGTGKTTFIRMLAGKLAPDAGNKVPSLNISYKPQKISPK
STGTVRQLLHEKIRSAYVHPQFITDVMKPMMMDNIIDQEIQNLSGGELQRVAIALCLGKP
ADVYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFSGRP
SIETTANHPQPLLSGMNSFLESLEITFRRDPNNFRPRINKLNSVKDAAQKKSGQYFFMED
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactccaacacccgtattgcgatcgttaataacgacaaatgtaaacctaaacga
tgccggcaagaatgtcggaaatcttgccctgtcgtccgaatgggaaaactttgtattgaa
gtgaccccactttccaagttagcctggatatccgaagagttatgcataggttgtggtatc
tgcgtcaaaaaatgtccgttcgaagcgatttctatcattaatctacctagcaacttggag
aaggacacgacgcacaggtacagcgcaaattcgttcaaacttcatcgactaccgatccct
agggcaggagaagtgctcggtttggtcgggacgaatggaatcggaaaatctactgcttta
aaaatcctcgctgggaaacagaagccaaacttaggaagttacgacgaaccaccagactgg
acagagatcttgagttacttccgcggttcagagttacagaattacttcaccaagattttg
gaagatgatatgaaagctgttataaaaccacaatatgtggatcagataccaaaggctgtt
aaaggtacagtgcaggctatgctggatcgtaaggatgactctggaactcaggaagagttt
tgtggactcctggatctaaaccatgttcttacacggaagatagaagatttatccggaggg
gagttgcaacgattcgcgattgctgttgtctgcatccaaaaagcggacgtttatatgttt
gatgagccgtcttcgtacttagacgtcaagcaacgcttaaacgctgctgttgcgatcagg
aatcttttggggacgacaaactatgtgattgttgttgagcatgatttaagtgtgttggat
tatttgtccgatttcatttgctgcttgtatggtgtacctggtgcttacggtgtcgtgact
atgccaagttccgtgcgggaaggaatcaatattttcttggatgggttcgtgccatccgag
aatctacgtttccgagacagctcgctggtttttaaagtctcggagacggcagaaggagaa
gaggacgtgaagaaaatgtgcagatactcctatggagacatgatgaaaaaacttggagat
tttgaactcacagtgaaaggaggagaattcaccgactctgagatcgtggtcatgctgggg
gaaaacgggacggggaagacgactttcattcgaatgctcgctgggaagttggctccagac
gctgggaataaagttccatcactcaacattagttacaaacctcagaagattagtccaaag
tccacaggcactgtccgtcaattgcttcacgagaagatccggagcgcttacgttcaccca
caattcatcacagatgtaatgaaaccaatgatgatggataatattatcgatcaggagata
cagaatttatcaggaggtgaactacaacgggtggcaattgctttgtgtcttggtaaacct
gccgatgtttatttgattgatgaaccgtcggcttatcttgattccgagcaacgtattgtt
gcagcaaaggttatcaaacgtttcattctccacgccaagaaaacagcatttgttgtggag
cacgattttataatggcaacttacttagcggaccgtgtgattgtattcagcggtcgtcca
tcaatagaaacaacagcaaatcacccccaacctttactatcgggcatgaacagtttcttg
gagtcgttagaaatcactttccgacgagacccgaataactttcgtccacgaattaacaag
cttaactcggtaaaggacgcggcacagaagaagtccggccagtatttctttatggaggat
tag
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integrated database retrieval system
