KEGG T01056: 100184693

Ciona intestinalis (yellow sea squirt): 100184693

Entry

100184693         CDS       T01056

Name

(RefSeq) proliferating cell nuclear antigen-like

K04802

proliferating cell nuclear antigen

Organism

cin Ciona intestinalis (yellow sea squirt)

Pathway

cin03030

DNA replication

cin03410

Base excision repair

cin03420

Nucleotide excision repair

cin03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:cin00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100184693
   03410 Base excision repair
    100184693
   03420 Nucleotide excision repair
    100184693
   03430 Mismatch repair
    100184693
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cin03032]
    100184693
   03400 DNA repair and recombination proteins [BR:cin03400]
    100184693
DNA replication proteins [BR:cin03032]
Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100184693
DNA repair and recombination proteins [BR:cin03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100184693
   MMR (mismatch excision repair)
    Other MMR factors
     100184693
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    100184693

SSDB

Motif

Pfam:

PCNA_C PCNA_N Rad1 Rad9

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

12:complement(4411781..4413330)

AA seq 262 aa
MFEARLVQGSLLKKVQEALKDIVNEASWDCTSSGLSLQAMDSSHVSLVQLTLRADGFEKY
RCDRNLAMGINMTSMSKILRCAGNEDVITLRADDTADLLEMVFESPKGEKISNYDMKLMD
IDCEQLGIPDQEYSCTIKMPSHEFARICRDLSQIGECVIITCTKDGVQFSAKGDLGSGTI
KLSQNSAAEKEDDQVTIEMTEPVQLTFAIKYLNLFTKATPLSGAVCLSMSNDIPLVVEYK
IEDMGHIKYFLAPKIEDEEEAE

NT seq 789 nt +upstreamnt +downstreamnt
atgtttgaagcacgtcttgtccaaggaagtctgctaaaaaaagtccaagaagcgttgaaa
gatatcgtgaacgaggcgtcatgggattgcacgtcatctggattgagcttgcaagccatg
gacagctcccacgtctcccttgtgcaacttactctgcgcgctgacggcttcgagaaatac
cgatgcgaccgaaacctcgccatgggcatcaacatgacaagcatgtcgaagattttgcga
tgcgctggaaatgaagacgtgatcactcttagagcggatgacaccgctgatctgctggaa
atggtcttcgaatccccgaagggtgaaaaaatttccaactatgacatgaagctgatggac
atagactgtgagcagcttgggattcctgaccaggagtatagctgtaccatcaagatgcct
tctcatgagtttgcaaggatttgccgtgatttgagtcaaattggtgagtgcgtcatcatc
acatgcactaaggacggggttcaattctcagccaagggagatcttggaagcggtacgatc
aagctttcgcaaaacagcgcagcagaaaaagaagatgaccaagtcacgatcgagatgacc
gagccagttcaactaacctttgcgatcaagtatctcaaccttttcaccaaagctactcct
ctttctggtgccgtatgtctctcaatgtccaacgacatccctcttgtggtagagtacaag
atagaggacatgggacacatcaagtacttccttgctccaaagatcgaagatgaagaggag
gcagaataa

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