Ciona intestinalis (yellow sea squirt): 100184758
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Entry
100184758 CDS
T01056
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100184758
Ion channels [BR:
cin04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100184758
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GFIT
Motif
Pfam:
Ank_2
Ion_trans
PKD_channel
Ank_4
TRP_2
Motif
Other DBs
NCBI-GeneID:
100184758
NCBI-ProteinID:
XP_002126666
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Position
8:complement(1015734..1023857)
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AA seq
741 aa
AA seq
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MEEDMSLVEVVTEIDGNILKRNSNDIEMHRLIHAESEEVHETHSSSSSSSDKSSTSSFEE
GSNHHEVKPSIEREIVVVAALEQMSPAQQWELKQQKKREMKMQNELREKIEAGCRIRQIL
ASPDWDGSIPKLLIAKVTSGDWREVEAIFAILKQEEYSDEYFYGVQDEKKRRPLRIAVEN
RDTKMLELLISDPIFNQEKIRLFKECCLYTAIASNYLEGVKLLLKLENKDELRVRKSGHG
FIEGTTPQMLAAYHNNYEILTYLQTIVSIKIEKPPTNNMHFVWEDSYRLQIISKARSTPA
YIVALSDDDRKFDTFEYCIEIVNELRHLAKVEHEFSEFYLQLVEDVEKFMCKLLDQIESS
SDLAEIFEYNYDKTARTQTLKYIHQTSSADDPDSGIVEVGVGTRLRMLEDACENKIVNFV
THHNAQLAVEHLTYRNTPFFRTGNHITFYLTRIMLALMFPVLSIFNIVAPKSKPGRLITY
PCTSYDCRMMSEFLFVVFLVTNISTKNENLEYLGAPPTVWELLILLWVLGKWVQEIQEVF
KRGLKSYLMDPWNHLDLLAIILFASCYAFRIVDYVKYKEVPFQQRPPRSEWNMFEWRLVA
EILIACAYVFVFMRLLGLTRVNRALGPLQISLARMIIDVIQFLCIFGFIMFAFALALAEL
YWFYGTAKGKEIFCDRLEKSNSTLNATLPAPKAIRISKAFGILSLSCFGLCLDKWILAIF
LFLENTCSRNMLQKFCWQFIT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatatgtcacttgttgaagttgtaacagagatagatggaaacatcttgaaa
aggaattcgaacgatattgaaatgcatcggttgattcatgctgaaagcgaagaagttcat
gaaactcattcttcgtcatcatcaagttcagataaatcttcaacatcttcatttgaagag
ggatcgaatcatcatgaagtaaaaccatctatcgagcgcgaaattgttgtggtcgcggca
ctggagcaaatgagtccagctcaacagtgggagttaaagcagcagaagaagagagaaatg
aagatgcaaaacgaactcagagaaaagattgaagccggatgcagaatccgacagattctt
gcctcgccggactgggatggttcaataccaaagctactaatcgctaaagtaacgtccgga
gattggagagaagtcgaggccatctttgccatacttaaacaagaagaatatagtgacgag
tacttctacggcgtgcaagatgaaaaaaagagaaggcctcttcgaattgccgttgaaaac
cgtgatactaaaatgctagagctgctgataagtgatccaatatttaaccaagagaagata
aggctctttaaagagtgttgcttgtacactgcaattgcgagcaattaccttgaaggggtg
aagttactgctgaagttggaaaataaagatgaattgagggttcgcaaatccggtcatggt
tttatagaaggtactacacctcaaatgctggcagcctatcacaacaattacgaaatcctc
acttatttacaaacaatagtttccattaaaatagagaaaccaccaaccaataacatgcat
tttgtttgggaagactcgtaccgcttgcaaattatttcaaaggcaaggtcaactccagct
tacatagtggcactaagcgacgacgacagaaaattcgacacgtttgagtattgcattgaa
attgtgaacgagttgcgacaccttgctaaagttgaacatgagttcagtgaattttatcta
caacttgttgaagacgtggaaaaattcatgtgcaaactactagaccagatcgagtcgtcg
tcggatttggccgaaattttcgagtataactacgacaaaacagccaggacacaaacattg
aagtacattcaccaaacttcatctgccgatgaccctgactctgggattgtagaagttggt
gttggtacaaggttgagaatgctggaggacgcttgcgaaaataaaattgtcaactttgtg
acgcaccataacgcacagttggcagtcgagcatctaacatacagaaacacgccattcttt
cgtacgggaaatcatatcacgttctatttgacaagaattatgctcgcgttgatgtttcct
gtacttagtatcttcaatatagtggcacccaagagtaaacctggaagactgataacatac
ccatgtacgtcatacgattgtcgaatgatgtcagagtttctgtttgttgtatttcttgtg
acaaatatttccacaaagaatgaaaacttggaatatttaggcgcaccaccgactgtgtgg
gaattgctcattctactttgggtgctggggaaatgggttcaagaaatccaagaagttttt
aaacgtgggttaaagagctatttaatggacccgtggaaccaccttgatttattggcgata
atattgtttgcgtcatgctatgcctttcgaatcgttgattacgtcaagtataaagaagta
ccgttccagcaacgtccacctagatcagagtggaacatgtttgaatggcgattagtagca
gaaattcttatagcatgcgcttatgttttcgtgttcatgcgacttcttggacttacgaga
gtaaaccgagcacttggaccacttcaaatttccttggcccgaatgattattgacgtaatt
cagtttttgtgcatctttggtttcatcatgttcgcatttgctctagctctggccgagctg
tattggttttatggaactgcaaagggaaaagaaatcttctgtgacaggttagagaagtcc
aactcaacactaaacgcaactctccctgcaccaaaggcaatccgtatttccaaggcgttt
ggaattctatcgttgagctgttttgggctttgtttggacaaatggatattggcaatcttt
ctctttctggaaaacacttgttcacggaatatgttgcaaaagttctgctggcaatttatc
acataa
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