Ciona intestinalis (yellow sea squirt): 100184777
Help
Entry
100184777 CDS
T01056
Name
(RefSeq) syntaxin-7
KO
K08488
syntaxin 7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04130
SNARE interactions in vesicular transport
cin04140
Autophagy - animal
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100184777
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100184777
04140 Autophagy - animal
100184777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100184777
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100184777
Membrane trafficking [BR:
cin04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
100184777
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100184777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Syntaxin
YqfQ
Orf78
HFX_2341_N
Motif
Other DBs
NCBI-GeneID:
100184777
NCBI-ProteinID:
XP_002123047
Ensembl:
ENSCING00000012591
LinkDB
All DBs
Position
1:6539735..6542331
Genome browser
AA seq
282 aa
AA seq
DB search
MSVSMSYGRGDLTSDGFNSSASYNTGSYQNSGGTQDYTRLTQLIGTNIQKIAQNVQEFKR
MVNQLGTNQDTPDLRNRLHQRQHHTNQISKDTARYLKDVKGLPSTQAAAEQRRRKTQTER
LMADFSDVLNSFQAAQREAATTEKECVARVRASSTAHQEPGSDVLINIQGTMQDQQQATV
SAEELQDIEERETAIRQLEADIMDVNMIFKDLGTMVHEQGEMIDSIEANVEHAEQDVVQG
NVQLVQARASQSSARKKKLICFILLIVAIVVIALIIYFSVKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgagcatgtcatatggaagaggtgatttaacaagtgatggcttcaacagttca
gcatcatataacactggttcataccagaattctggaggtacccaggattacaccagactt
actcagcttataggaacaaacattcaaaaaattgcgcaaaatgtccaagaatttaaacga
atggttaatcaattggggaccaatcaagacacacccgatctaagaaacagactgcaccag
agacaacatcatacaaaccaaatatcaaaagacacagctcgttatttaaaagatgtcaaa
ggactaccttccacccaagcagcagctgaacagagacggcgaaaaacacaaactgaacga
ctaatggctgattttagtgatgtacttaactcattccaagcagcacagagggaagcagct
acaacagaaaaagaatgcgttgcaagagttcgagcatcaagtacagctcatcaagaacca
ggatctgatgttcttattaatatacaaggtacaatgcaagaccaacagcaagccactgta
tcagctgaggaactgcaggatatagaagaaagagaaactgctatacggcaacttgaggca
gatataatggatgtaaatatgatcttcaaagacctgggtacaatggtgcatgagcaggga
gaaatgatagacagcatagaggcgaatgttgagcacgcagagcaagatgttgtacagggg
aatgttcaacttgtacaagcacgtgcaagccagtcaagtgcacggaaaaagaagttaatc
tgtttcatcttacttattgttgctatcgttgtgattgcactgattatctatttctctgtg
aagaaatga
DBGET
integrated database retrieval system