Ciona intestinalis (yellow sea squirt): 100184786
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Entry
100184786 CDS
T01056
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00500
Starch and sucrose metabolism
cin01100
Metabolic pathways
Module
cin_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100184786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100184786
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
100184786
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100184786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
CBM_48
CBM53
Motif
Other DBs
NCBI-GeneID:
100184786
NCBI-ProteinID:
XP_002131559
Ensembl:
ENSCING00000021526
LinkDB
All DBs
Position
11:complement(887482..890505)
Genome browser
AA seq
692 aa
AA seq
DB search
MDSGDGLKSSSNMVVPDLQTFLEIDPYIENFTGDIKRRYEMFSKTKARIEAAETMEKFSQ
SYKNFGVKGKPDGSVHCKEWVPGAKAVYLRGAFNNWERWGYSYEKKEFGKWELVLPPKDD
GSSMIEHLSELMLIIQTHDDQYLERISPWATYVKQFDNHGTYKWIFWNPPQSELYHFKNQ
RPKKPKSLRIYEAHVGIASSEPKVASYKNFTDTVLPRIKKLGYNCVQLMAIMEHAYYASF
GYQVTNFFAASSRYGTPTELQELIDTAHGMGLYVLLDVVHSHACKNVLDGLNMFNGTDSC
FFHSGSRGVHSQWDSRLFNYSEWEVLRFLISNLRWYMEEYKFDGFRFDGVTSMIYHDHAI
SRGFSGDYHEYFGLQMDMESLVYLILANDMIKTFLPDAITIAEDVSGMPGMCRPVSEGGI
GFDYRLAMAIPDQWIKILKEARDEDWDMDHIFHTLTNRRHGELCIAYAESHDQALVGDKS
LAFWLMDKEMYTHMSECTHLTPIIDRGISLHKMIRLITHGLGGEGYLNFIGNEFGHPEWL
DFPRAGNSSSYHYARRQFHLVDDNLLRYKFLYKFDSAMQNTEETYGWLAAKQAYVSRKHN
GDKVFVFERAGVLFLFNFHHSQSFTGYRVGVQNPGKYKIVLDSDDSEYGGHNRNDKSVRF
FTEEMAFDGREHSMLVYLPCRSAMIMAKDDTD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggattctggagatggtttaaaatcaagttcgaatatggtggtccctgatcttcaaact
ttcttggagattgatccctatattgaaaacttcactggagacattaaacggaggtatgag
atgttttcgaagaccaaggccaggattgaagctgcagaaacaatggaaaaattttcacaa
tcttataaaaattttggtgtgaaaggaaaacctgatgggtcagtgcattgtaaggaatgg
gtacctggggcaaaggcagtttatctgcgtggagcttttaataattgggagcgatggggg
tacagttacgagaaaaaagagtttggtaaatgggaattagtgttaccaccaaaagatgat
gggagttctatgattgaacatcttagtgaactcatgcttattatacaaacgcatgatgat
caatatcttgaaagaatttccccttgggctacttatgtcaagcagtttgacaaccatggg
acatataagtggatattttggaatccccctcaaagcgaattgtatcactttaaaaaccaa
cgccccaaaaaaccaaagagtttaagaatttatgaagctcatgttggaattgcttccagt
gaacccaaagttgcttcctacaaaaactttacagatacagttttaccaagaatcaaaaaa
cttggctataactgtgtccaactaatggctataatggagcacgcttattatgcgagcttt
gggtaccaggttaccaatttcttcgctgcatcaagtcgctatggtacacctacagaactg
caagagctgatcgatacagctcatggcatgggcctctatgtattgttggatgttgtacat
agccatgcctgcaagaatgttctggatggactgaatatgtttaatggaacggactcgtgt
tttttccattctggttccaggggagtccacagtcagtgggacagccggctcttcaactac
tcagagtgggaagtgctgaggtttctcatttccaaccttcggtggtatatggaggaatat
aagtttgatggtttccggtttgacggagttacttctatgatctaccatgaccatgcaatc
tcaagggggttttcaggagattaccatgagtattttggccttcagatggacatggagtca
ttggtgtacctgattcttgccaatgatatgataaagaccttccttcccgatgcaatcaca
attgcagaagatgtttctgggatgccaggaatgtgtaggcctgtcagtgaaggagggatt
gggttcgattaccgacttgcgatggcaatcccagaccagtggattaagatccttaaagag
gcgcgggatgaggattgggacatggatcatatcttccatacactcactaaccgaaggcat
ggggaactttgcattgcatacgctgagagtcatgaccaagcgcttgttggagataaaagc
cttgctttctggttgatggataaagagatgtacacgcacatgtcagagtgcacccacctt
actcctatcattgatcgtggcatctcacttcataagatgatccgtctcattacacatggt
cttggaggagagggatatctcaatttcatcgggaatgagtttggtcatccagagtggctg
gacttcccaagagccggaaacagttcaagttaccattatgctcgccgtcagtttcacctt
gtggatgataacctgttgaggtataagttcctttacaagtttgactctgccatgcagaat
acagaggaaacatatggttggttagcagcaaaacaagcctatgttagtagaaagcacaac
ggtgacaaggttttcgtattcgagcgagccggggtcttgtttctattcaacttccatcat
tcacaaagtttcactggttatagggttggagtccaaaacccaggaaaatacaagattgtt
ttagattctgatgactcagagtatgggggacacaatagaaatgataagtctgtgaggttc
ttcacggaagagatggcttttgatggtagagagcattctatgctcgtatatctgccttgt
agatctgctatgataatggcaaaggatgacactgactaa
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