Ciona intestinalis (yellow sea squirt): 100184816 Help Entry 100184816         CDS       T01056                                  Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03040   Spliceosome Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100184816  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cin03041]     100184816 Spliceosome [BR:cin03041]  Complex C   Other components    Step II factors     100184816 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_IFT140_1st Motif Other DBs NCBI-GeneID:  100184816 NCBI-ProteinID:  XP_002129631 Ensembl:  ENSCING00000009666 LinkDB All DBs Position Unknown AA seq 519 aa AA seqDB search MVMFNPTYEEMHAPEQGPANPFKTKQQLAQKNTLAGFVQEAHFNHFTFENQRRTFHSYGY AVDPSNDETEAGDKIVVSNVDFDHDPDEDKPPKEPKQVDPSDAKTVFEKIKARPEDKRKR IRQNDAADIEGFLGPWGGFVDEQKIAKPDEETQKELDEMTAKRQKKGKPAEEKFVEEKTT LHVQDPHDYQGRSYLHIPQDVGVNLKSSMPPDKCYLPKRLIHTWSGHTKAVSSIKLFPKS GHLLLSSSMDCKVKLWEVYNKRRLLRTFSGHGKAVRESSFNNDGSKFLSAAYDRYIKLWD TETGQCISRFSNKKIPYCVKFNPDENKQHLFVAGLSDKKIVTWDSRSKDIVQEYDRHLGA VNTITFVDNNTKFVSTSDDKSLRVWEWDIPVDFKYIADPTMHSMPSVTLSPNEKWLGCQS LDNQIMIFDVQGRFRLKRKKIFKGHMVAGYACQMTFSPDMSYVASGDGDGKVFIWDWKTT RMYSKFQAHESVCIGCVWHPHETSKLITCGWDSQIKLWD NT seq 1560 nt NT seq  +upstreamnt  +downstreamnt atggtgatgtttaacccaacatatgaagagatgcacgcccctgaacagggacctgctaat ccattcaaaacaaaacaacagttggcgcagaaaaatacgcttgcagggtttgtacaagaa gcgcatttcaaccacttcacatttgaaaatcaacgaagaactttccacagctatggttat gctgtagatccatcaaatgatgaaacggaggctggagacaaaattgtcgtttcgaatgtt gattttgaccatgaccctgacgaggacaaaccacccaaggaacccaaacaagttgatcct tctgatgcaaaaactgtgtttgagaagatcaaggctcgtcctgaagataaaaggaaacgg attcgacagaatgacgctgcggatatcgaaggtttcctcggaccatgggggggtttcgtt gatgaacagaaaatagctaaaccggatgaggaaacacagaaagaacttgatgagatgaca gccaagcgacaaaagaaaggaaaaccagctgaagaaaagtttgttgaagagaaaacgacg ttacacgttcaagatccccacgattatcaaggtcgttcatatcttcatattccacaagat gttggcgtcaaccttaaatcaagtatgcctcccgataaatgctatctacccaagcgactt attcatacatggagtggtcacacgaaggcagtatcgagcattaaactttttccgaagtca ggtcacctattgctttcctcttcgatggattgtaaagtcaaattatgggaagtttacaac aaacgtcgattgttacgaacgtttagtgggcacggaaaagctgttcgagaatcaagtttc aacaatgatgggtcaaagtttttatcagctgcgtacgacagatatattaaactatgggac actgagaccggccaatgtatatcacgtttttcaaacaagaaaattccatattgtgtaaaa ttcaatccagatgaaaataaacaacatctatttgtagcgggattgtcagacaaaaagatt gtgacgtgggattcccggtccaaagatattgtacaagaatacgacagacacttgggtgca gtgaacacgataacatttgtcgacaataatacaaagtttgtttcaacttctgatgacaag agtctcagggtttgggaatgggacataccagttgattttaaatacatcgctgatcccacc atgcactccatgccatcggtcaccctctcacctaatgagaaatggcttggttgtcaatct ctggacaaccagatcatgatattcgacgttcaaggaaggtttcgactcaaaagaaagaaa attttcaaagggcatatggttgcaggttacgcttgccaaatgacattttctcccgatatg tcatatgttgcctctggagatggagatggtaaagtttttatttgggattggaaaactact cgaatgtacagcaagtttcaagctcacgagagtgtttgtattggttgtgtttggcatcca catgaaacctctaaactgataacttgtggctgggatagtcagatcaaactgtgggattga

DBGET integrated database retrieval system