Ciona intestinalis (yellow sea squirt): 100184822
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Entry
100184822 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100184822
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100184822
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100184822
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
PCRF
UnbV_ASPIC
Mis12
Motif
Other DBs
NCBI-GeneID:
100184822
NCBI-ProteinID:
XP_002130812
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All DBs
Position
8:5301271..5311910
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AA seq
541 aa
AA seq
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MPRIVSNMSRHEGVSCDNCLKSNFEGKRFKCLICYDYDLCESCHVFEINTSRHSSTHPMQ
CILTRNEFELYYGGENISPESPPSFVCPFCAKLGFTEALLHEHVNKEHADAHSEVVCPIC
AALPSGDPNLVTDELATHLSMEHRAPRDAEDQAGGRHIRRMFYPGRGMRSRNHRNMHFSS
GPATSAIPTPAVANNNVASSVISAGRDSMDPIAELLSQLSGVRRSAQQLQQTVTTSSQLQ
ELQSQLQMERQRAAELRQQLERFPSKSNPSTNHGVHVQPSGGGNNSSKSATKRPNCNVHS
DDDDDSRYLLSNLDELNLSSKEKEQQSNEDGQRSLFVQELLLSIFSEGADSHLEQDGSPP
LHMQRAMPTECPLLASTPNNTTSSGRPLESSSEISEDRGPWVKDGNKSSSNNKEDTGVGH
SMSSGNAQSPLAPSLSEACESPQFADVQPTGSRSAPVLTPDSSDRLSSDPERWIYREDDD
SKDSDEDKPPSPTPMLNMRIPGRMFGAGARPVRVAGGVGGAAVNDFNRDEVSSSTLTKHI
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaattgtctcaaatatgtcacgtcatgaaggtgttagttgtgacaactgcttg
aaaagcaactttgagggaaaacgatttaaatgcttgatttgttatgattatgacttatgc
gaaagttgtcatgtgtttgaaataaatacttcccgacattcctctactcaccccatgcag
tgcattttaacaaggaatgaatttgaattatattacggtggtgagaacatttcccctgag
tctcctccttcgtttgtttgccctttctgcgccaaacttggatttactgaggctttgctt
cacgagcatgttaataaagaacatgctgatgcacattcagaagtggtgtgtccaatatgt
gctgcattgccttccggtgatcctaacctggtaacagacgagttggcgactcatttatca
atggagcaccgagcacccagggatgctgaggatcaagctggtggaagacatatacgacgt
atgttttaccctggtcgaggcatgaggagtcgcaaccatcgtaacatgcacttctcaagt
ggaccagcgacgtctgccatacctacaccagcagtcgccaataataacgttgcatcttcg
gttatatcagcgggcagagactcaatggacccgattgctgaacttttatctcaactgagc
ggagtacgcaggagtgctcaacaattacaacaaacagtaacaacatcgtcccaactacaa
gaactacaatctcagcttcaaatggagcgacaaagagcagcagaactaagacagcagctt
gagaggtttccaagcaagtcaaacccgagcaccaaccatggagttcatgtccagccctct
ggtggtgggaataactcgtcgaaatctgccacaaagcggccaaactgtaacgttcactct
gatgatgatgatgatagtagatatctattgtcaaatttggacgaactgaacttgtcgagc
aaagaaaaagagcagcagagtaacgaagatggccaacgtagcttgtttgtgcaagaactt
ttgctttcaattttctccgagggtgcggacagtcaccttgaacaagatggctccccaccg
ctccatatgcaacgagccatgcctaccgagtgccctctgcttgcttccacaccaaacaat
accacttcaagtggtcgacctttagaatcatcttccgaaatctcggaggacagggggccg
tgggtgaaagatgggaataaatcttcttcaaataacaaagaagacaccggcgtaggacac
tcaatgtcgtcaggaaacgcgcagtctccgcttgccccatcactcagtgaggcatgcgag
agtcctcagtttgcggatgtacaaccaacaggatcaagatcggctcctgttctcactcct
gattcaagcgatcgcttgtcctctgatcctgagcgatggatttacagagaagatgacgat
tctaaggacagtgatgaagataaaccgccgtcacccaccccaatgctcaacatgcgcata
ccaggccgaatgttcggggctggggcacgacctgttcgcgtggctggtggcgttggtggt
gccgctgttaatgattttaatcgggatgaagtgtcttctagtacgttaaccaaacatatt
cgttaa
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