Ciona intestinalis (yellow sea squirt): 100184851
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Entry
100184851 CDS
T01056
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100184851
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GFIT
Motif
Pfam:
Ncstrn_small
Nicastrin
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100184851
NCBI-ProteinID:
XP_009862509
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Position
1:complement(8995298..9005052)
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AA seq
707 aa
AA seq
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MKFLFPVWTIFIFCLSCDFVFSQTSKVYKLIYKDFDVNSYDKCIRLLNGTSEIGCQSKNG
GNTGAIYHVNSTVRITDFLQNSHLKNYIPLVDVNYFNNKLIQQFINSGKVQGVLVYEPEG
FVKPSNSWSPELKCPKERFGLYNASYGPQYECKPDNNPWNPPGDGLTQQNIPFPIFHILQ
TEAVQEIVQCYNKYNSKEVYPLCSMQMKSHMFGAVDAPTCIRRTTYQTTLTPQMYCDAMG
GWNMVASLKPLISRKNKTKSDSTILVTAALDSRAFMMLNTAPGNSLATGFITLLAVAKAI
GGISEKQKNELNKNIMFVLFDGEAFDNIGSTRTVFDMQHMNFPVVENKAMIQPAAVKLED
IDSIVEIGELGHVDSQLYVHTDPMSAALHKSRIDQIIAEINNNAQGINATKASSSVGLVP
SSLQTFLKSRNLPGVVVTDYDKQTKNKYFFSRYDELKNLNINYNGNTTDEEMLQLLQPLA
QKLSNVALATAKMLYLEAATTSILPPEISLNTSLVTEMLFCYLYKANCSLFTEATSTNSV
TKLPNFPYNRYVTVFQTSTTGLPIINNWGVLSRNLLAIFTGEHLPDNSTTCQRSLSTDET
TTYFYFNGKLNNGTRENFCVKSSSFVTKALAPAIEDNELTSNVENYGLWAESRWTTTTFN
LRMFLQHDEVNQGMTLLAGLLVLLVSFTVVYIVDTKAETLFQPAGVI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctttttcctgtgtggaccatctttatcttttgtttgagttgtgattttgtc
ttctctcaaacatccaaagtttacaaactcatctacaaggacttcgatgtgaattcttat
gataaatgtattcgactactgaatggaacttcagagattggatgccaatcaaagaatgga
gggaacacgggagcaatttatcatgtcaactcaactgtcagaatcactgactttttacag
aatagtcatctgaaaaactacattccgttggttgatgttaattactttaacaacaaattg
atccaacagtttataaatagtgggaaagtacaaggagttcttgtttacgaaccagaaggt
tttgttaaaccatccaatagttggtctcctgaactaaaatgtccaaaggaaagatttggt
ttatacaatgcaagttatgggcctcaatatgaatgcaagcccgacaataacccatggaac
ccacctggtgatggattaactcaacaaaatattccatttccgattttccacatccttcaa
actgaagcagtgcaagagattgttcagtgttacaacaagtacaactccaaggaagtctac
cctttatgttcgatgcaaatgaagtctcatatgtttggagctgttgacgcaccaacttgt
ataaggagaacaacttaccaaactacattaacaccacagatgtattgcgatgctatggga
ggctggaacatggttgcgtcattaaaacctcttataagtcgaaagaacaaaactaaatca
gattcaacaatattggttacggcagctttggatagtcgtgcttttatgatgttaaatact
gcacctgggaattctcttgctactggttttataactctgcttgctgttgctaaagctatt
ggtggaataagtgaaaaacagaaaaatgaattgaacaagaatattatgtttgtacttttt
gatggggaagcatttgataacattggtagcacaagaactgtgtttgatatgcagcacatg
aattttccagtggttgaaaacaaggcaatgatccaaccagctgcagtaaaacttgaagac
atcgacagtattgttgagattggtgaacttggtcacgtggatagccaactatatgtacat
actgatccaatgtctgcagctttgcacaagagcaggattgaccaaataattgcggaaatc
aacaacaacgcacaaggtataaacgcaacaaaagcctcgtcttctgttggtttggttcct
tcttctttacaaacctttttaaaatcacgaaatcttcccggggtcgttgtcactgattat
gacaaacaaaccaaaaacaagtatttcttcagtcgttatgatgaattaaaaaacctgaat
ataaactataatggaaacacaacagatgaagaaatgcttcaactattgcaaccccttgcc
cagaaactatcaaatgttgctcttgccactgcaaagatgctttaccttgaagctgcaact
acttcaattttacctcctgaaatttcattaaatacaagtttggtaaccgagatgttgttt
tgttatctttacaaagcaaactgcagtttatttactgaagccacttcaactaatagtgtg
accaagctacccaattttccgtacaacagatatgtcactgtgtttcaaacgtcaactacc
gggttgcccatcattaacaactggggtgttttatctcgtaacctgctggctatcttcacc
ggcgaacatctacccgacaattctacaacatgccaacgatcactttcaactgatgaaacc
accacctatttctatttcaacggcaaattaaacaatgggactcgtgagaacttttgtgtg
aagtcctccagctttgtaacaaaagctcttgcccctgcaattgaagataatgaacttaca
agcaatgttgagaactatggtttatgggcagaaagtagatggacaacgacaacttttaat
ttaagaatgtttcttcaacatgatgaagttaatcagggtatgactcttttggcaggcttg
ttagttctccttgtgagttttacagttgtttacatcgttgataccaaagctgagacgttg
ttccaaccagcaggtgttatatga
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