Ciona intestinalis (yellow sea squirt): 100184927
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Entry
100184927 CDS
T01056
Name
(RefSeq) complement component C6-like
KO
K03995
complement component 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MACPF
TSP1_spondin
Ldl_recept_a
TSP_1
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
100184927
NCBI-ProteinID:
XP_002128860
Ensembl:
ENSCING00000008760
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MKSLFAVIWVLVLVLLFCEGGEAWRRRRRRRRAPAPVHCVVSGWTFWTGCSKTCGGGQSI
RTRHIVRGPAHGGRGCPGLRETRACYAQACPVPTTCQWSSWGAWSSCDPCFPGGRSRSRN
VTVPAMFYGAQCSGSRALTDYSCTTGQACVEKTCPANKFTCADGLGCISERFRCNGDNDC
TDFSDEEDCSNFRSPCGSRKYQGIPNIDIAGSGFDITKLREEGRIMDNERYNGRCSTVRS
GDLGERFRKPANVQIYRFQVRVDSSFTTKSFESSMNYFQDERSSYERKLDASASVSYAKI
FSLSAKSSGSNSGKTKMVIDYGTNSDSKFFKISSTVQVAHFRMVRRNLLLSYEFMLRLKE
LPDNFDYAKYAEVISDFGTHFYSRGVLGGKYEYVYRYSKKALRQSDLTDVEQQGCLVQEA
KASFMGKFSVDASVGKSKCSTNQLSLKHGGSFTRAATNVVSNVVGGTSVKAAALSFFSGK
TPNKSDYDEWVKTVKHNPAVIDYQLSPISSAVPLSTYNKRKNMERALVLYLKEYDFSKCT
GKCAHGGAVVVVNGGKLCKCLCPANYGGIDCNVHT
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttgtttgcggtgatctgggttctagtattggtattgcttttctgtgaggga
ggtgaagcatggagaagaagaagaagaagacgaagggctcctgcacctgtacattgtgtc
gtttctgggtggactttttggactggctgctctaaaacatgtggtggaggacagtcaatt
aggacaaggcacatcgtaagaggcccagcccatgggggtcgtggttgtccaggtttgcgt
gaaaccagagcttgctacgctcaagcgtgtcctgtgcctactacatgtcaatggagctca
tggggtgcatggtcgagctgtgatccttgctttccaggaggaaggagccgatctcgaaat
gtaactgtcccagcaatgttctatggagcgcaatgttctggatcaagagctctcacagat
tattcatgtaccactggacaagcttgcgtagagaaaacttgtcccgccaacaagtttact
tgtgctgatggtcttggttgcatttctgaaagattccgttgcaacggtgacaatgattgc
acagatttctcagatgaagaagattgttcaaactttcgctcaccttgtggaagtcgaaag
tatcaaggcattccaaacattgatatcgccggatctggtttcgatatcacaaaactgcga
gaggaaggtagaatcatggacaatgaaagatacaatggtagatgctcaactgtgagaagt
ggtgaccttggcgaacgctttagaaaaccagcaaatgttcaaatatatcggtttcaggtt
cgtgttgattcctcattcaccacaaagtcctttgaatcatctatgaactactttcaagat
gaaagatcatcttatgagcgtaaactagatgccagtgcatcagtttcttatgcaaaaata
ttcagtttgtcagcaaagtcttctggttctaacagcgggaaaacaaaaatggtgattgat
tacggtacgaattccgactcaaaattcttcaagatatcaagcactgtgcaggttgcacat
ttcagaatggttcgtcgaaatcttcttctttcatacgagttcatgctacgtctaaaggaa
cttccagataatttcgattacgcgaaatatgctgaagtaatctcagactttggcacccat
ttctactccagaggtgttttgggtggaaaatatgagtatgtgtaccggtactccaagaaa
gcacttcgtcaatcagatctcacggatgtagagcaacaaggttgtttagtacaggaagca
aaagcttcttttatgggcaaattcagtgttgatgccagtgttggaaaatccaaatgttca
acaaaccaattgtcgctaaaacatggaggaagtttcactcgtgctgctacaaacgttgtt
tctaatgtggtcggtgggacatctgtcaaagctgctgctctgagtttcttttctggaaaa
acaccaaacaagtcagattacgatgaatgggtaaagacagtcaaacacaatcctgcagta
atagattatcagctttcgcccatatcgtctgctgtgccattgtccacctacaacaaaagg
aaaaacatggaacgtgctttagttctctatttgaaggagtatgacttctccaagtgtacg
ggtaaatgtgcgcatggaggagcagtggtcgtggtgaatggtggaaagctctgcaaatgt
ctttgccccgccaactatggtggcattgattgcaatgttcacacatag
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