Ciona intestinalis (yellow sea squirt): 100184967
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Entry
100184967 CDS
T01056
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00020
Citrate cycle (TCA cycle)
cin00640
Propanoate metabolism
cin01100
Metabolic pathways
cin01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
100184967
00640 Propanoate metabolism
100184967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100184967
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
100184967
6.2.1.5 succinate---CoA ligase (ADP-forming)
100184967
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100184967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Citrate_bind
EURL
Motif
Other DBs
NCBI-GeneID:
100184967
NCBI-ProteinID:
XP_002131966
Ensembl:
ENSCING00000007326
UniProt:
F6YK29
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Position
8:complement(4191074..4195495)
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AA seq
432 aa
AA seq
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MAGSFRQIMVKYAANQRLLNLFDKGGSSHVACRRWLNLQEYQSKKLMENFDVNVQRFKVV
ESAADAKNAAQHILDTNAKELVVKAMILAGGRGKGKFSSGLQGGVHLTTDPTKVSDLCKD
MLGYNLVTKQTSAEGVTVKKIMVAEALDITRETYFAILMDRSYMGPVMVGSPAGGMDIEE
VAEKTPHLIFKDPIDIDKGIQESQAIKMAENLGFTGEKLQKAAEQITKLYKLFISVDATQ
VEINPLGETPDGDVVCFDAKVNFDDNAEFRQKEIFLMDDKSESDPKEVVAEENGLSYISM
DGNIACLVNGAGLAMATMDIIQHCGGRPANFLDLGGGVQEHQVYQAFKIVLSDTKVEAIL
VNIFGGIVDCKIIANGIVKAGKELNISMPLVVRLEGMNVNEAKEILKESNLPIVSANDFG
DAAEKVVASLKS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagttttcgacaaataatggtcaaatacgccgcaaaccagcgcttactaaac
ctctttgataagggtggcagcagccatgttgcttgcagacggtggcttaaccttcaagaa
tatcaaagtaaaaagttgatggaaaattttgatgtgaatgtccaacgatttaaagttgtt
gaatcagcagccgatgcaaaaaatgcagctcaacatatacttgacacgaatgcaaaagag
cttgttgtgaaagcaatgatacttgctggaggtcggggaaaaggaaaattctcaagtggt
ttgcagggaggagttcatttaaccactgatcctacaaaagtatcggatctctgcaaagat
atgttgggttataatctcgtcaccaaacaaacttctgccgaaggagttactgttaaaaag
ataatggtggcagaagcattagacatcacgcgtgaaacttactttgcgattctaatggat
cgaagttatatggggcctgtgatggttggaagtccagctgggggaatggatattgaagag
gttgcagaaaaaactccacatctaatatttaaggatcccatagacattgataagggtatt
caggaatctcaagcaataaaaatggctgagaacttaggttttaccggcgagaaactacaa
aaagctgcagaacaaatcacgaaactttacaaacttttcatcagtgtggatgcgactcaa
gttgagataaatccattgggagaaacgccagatggagatgtcgtttgctttgatgcaaaa
gtgaatttcgatgacaacgccgagttcaggcagaaggaaattttcctgatggatgacaag
agtgagagtgatcctaaggaagtggtggcggaggaaaatgggctgagttatatttctatg
gatggaaacattgcttgtcttgtaaatggagcaggtcttgccatggcaaccatggatatc
atccaacactgtggcggacgacccgccaacttccttgacttgggtggtggtgttcaagaa
catcaagtctaccaagctttcaagatagttttatcggatactaaggttgaagctatcctt
gttaacatttttggtggtattgtcgactgtaaaataatcgctaatggaatagtgaaagct
ggtaaagaactcaatatatcaatgcctcttgttgtaagattggagggaatgaatgtaaat
gaggcaaaggaaattttgaaagaaagtaatctcccaattgtttctgcaaatgattttgga
gatgcagctgaaaaagtggtggcgagtctcaaatcctaa
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