Ciona intestinalis (yellow sea squirt): 100185022
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Entry
100185022 CDS
T01056
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100185022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100185022
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100185022
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Gene cluster
GFIT
Motif
Pfam:
SNF
Gate
Motif
Other DBs
NCBI-GeneID:
100185022
NCBI-ProteinID:
XP_002127521
Ensembl:
ENSCING00000006880
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Position
7:complement(927371..935305)
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AA seq
659 aa
AA seq
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MLPTTKCKGCSKCRPDDVVPKLPAGCVIHPEYDDTGERGNWTNKAEFLLSMIGYAVGLGN
VWRFPYLAFENGGGAFLLPYLTMLVLAGLPIFFLEVSLGQFCSQGPLGAFNGVPIVKGLG
VAMVVVSVYVGVYYNVVICYTLYFLFSSLTSELPWNSCNNDWNTPACLHSTSIYNMTLNF
TLPSSLETGFNNSQRFNTTTSNFSMAHRISPSEEYWNYKVLEKTQGIENLGKIRWELALI
LLLAWVIIYACLIKGVKSSGKAVYFTATFPYVVLTVLLIRGLTLDGAMDGVRYFFEPRWE
KLLTAKVWKDAATQIFYSLSASWGGLITLSSYNKFNNNCYRDSVIVVLTNSFTSIFAGVT
IFAVIGFMAHVLKTDIASVAADGPGLAFVVYPEALSQMPFAPVWSVLFFLMLFTLGLDTM
FATLETIVTSLTDACPRQLRHRKCLFTLVVCIFLFLIGLPLVTQGGFFYLHLLDSYVASY
SLIVCAIVEMLSISYIYGLNRFCEDIKMMTGHKPNAYWKITWSVISPAVLTFILIYSIAD
YKPLKLDEYNFPLWANILGWFTVASSVMCIPIFAIREIVRNKGTFLERIKSACRPNKRWG
PYLLKDRVGFYAFNVHPPAVTNVRGIDNDSDATLLHDTIQDTPSTSKRNLNATATASEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgactacaaagtgcaaaggatgttccaaatgtaggcccgatgatgttgtaccc
aaactcccagctggttgtgtcattcacccggaatacgacgatacaggagagagaggaaac
tggaccaacaaagccgaattcttactgtctatgatcggttatgccgtgggattgggaaac
gtttggagatttccgtacttggcgttcgaaaacggaggaggcgccttcctattaccttat
ctcactatgctggttctagccgggctcccaatattctttctggaagtttccctaggtcag
ttttgcagtcaaggcccgttgggggcgtttaacggtgtgcctatcgtcaagggactgggc
gttgctatggttgtcgtatccgtatacgtgggtgtatactacaacgttgtaatttgctac
acgctatactttctgttttcttctctgacatcggaactaccttggaatagctgtaataac
gattggaacactcctgcatgccttcacagcacttcaatatacaacatgactttaaatttt
actcttccctcatctcttgaaaccggtttcaataattcacaacgattcaacacaactacg
tcaaatttctcaatggcacaccgcatcagtccgagtgaggaatattggaattacaaagta
ctggaaaagacgcaaggcattgaaaatcttggaaagatacgatgggaactggcactaatt
ttactccttgcatgggtcatcatatatgcatgtctaataaaaggcgttaagtcttcggga
aaagccgtatatttcactgcaacgttcccgtatgtggtgctcactgtattgttgatacga
ggtttaacattggacggagccatggatggagttcgctacttctttgaaccgagatgggaa
aaacttcttacagcaaaggtgtggaaagacgcagcaacccaaatattttattctttatct
gcatcttggggtggtttgattactttatcgtcgtacaataaattcaacaacaactgttac
cgggattcagtgatcgttgtacttaccaattccttcacgagtatcttcgctggtgtaacc
atctttgcagtgattggattcatggcgcatgtgctcaaaactgatatcgcttcagttgcc
gcagatggtcctggccttgctttcgttgtttatccagaagcattatctcagatgccgttt
gctcctgtgtggtcggtcctgttctttctaatgctgttcacactaggactcgacacaatg
ttcgctacgcttgaaaccattgtgacgtcactgaccgacgcttgtccccgccaactgcgt
catcgaaaatgtcttttcacgttggtggtttgtatatttcttttcctcattggactgcca
ctggttacacagggtggtttcttctatcttcacctcttggacagctacgtggcttcgtac
tccttgattgtttgcgccattgttgaaatgctatccatatcctacatatacggattaaac
cggttttgtgaagacattaaaatgatgaccggccataaaccgaacgcttattggaaaatt
acctggtctgttatatctcctgctgtattgacgttcatcctaatatacagtattgcggac
tacaaacctctgaaactggacgagtacaatttcccactgtgggcaaatatacttggctgg
ttcacagtcgcttcaagcgtcatgtgcattccaatatttgcaattagagagatcgtacga
aataaaggcactttcctagagcgcatcaagtcagcctgtaggcctaacaaaaggtggggt
ccttatctattaaaggacagagttggattttacgcttttaatgtgcatccgcctgcggtt
acaaatgtccgcggaattgacaacgattcagacgccacactgttgcacgacacaatacaa
gataccccgtcgacgtcaaagcgaaacttgaatgcgactgcaacagcttctgaaggctga
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