Ciona intestinalis (yellow sea squirt): 100185029
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Entry
100185029 CDS
T01056
Name
(RefSeq) vesicle transport protein SEC20-like
KO
K08497
protein transport protein SEC20
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100185029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100185029
Membrane trafficking [BR:
cin04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
100185029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
RACo_linker
E2R135
Motif
Other DBs
NCBI-GeneID:
100185029
NCBI-ProteinID:
XP_002129504
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All DBs
Position
1:2407999..2410307
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AA seq
243 aa
AA seq
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MSWVARVNRTNDVTSNSPEQCKDDIVKLNCALKAIIQDIWECKGPVLALNDLNKDARRLV
NELRSKISELDELANVADQERVRLDLKEDVENQTKQLENTQATLRKANLTCKLAIDNREK
DALLGSRETRTQQIRHRNTVASRQNIAQSASDITENLLTISRTLDNTVHQSSHALNSLVS
SSKTVKDTDTELKNQAGLIQTGHRLLTKYNRREYTDKILIFLALALFFSTVLYILKRRLF
PSL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagttgggttgcgcgagttaatcgaaccaacgacgtaaccagtaactcaccggagcaa
tgtaaagatgatattgtgaaattaaactgtgcactaaaggctataatacaggacatatgg
gagtgcaagggacccgtgcttgctctcaatgatttgaacaaggatgcacgaagattggtg
aatgaacttcgatctaagatttctgagcttgatgaacttgcaaatgttgccgatcaagaa
cgagttcgactcgatttaaaagaggatgttgaaaaccaaacaaagcaactcgaaaacaca
caagctacactgcgtaaagcaaatctaacatgcaaacttgctatcgataacagagaaaaa
gatgctttgcttggatcaagagaaacaaggactcagcagattcgacatcgaaatacagtc
gcgagtcggcaaaatatagcacaaagtgcgagtgacatcactgaaaacttacttactatc
agtagaacattagacaacacagttcatcaaagctcccatgctcttaacagtttagttagc
tcatcaaagactgttaaagacacggacaccgaattgaagaatcaagctggattgatacaa
actggtcaccgtttgctcaccaagtacaacaggagagaatacacggataagattctcata
tttcttgcacttgcattatttttctcaactgttttgtatattttaaaacgaaggttattt
ccttctttatga
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