Ciona intestinalis (yellow sea squirt): 100185056
Help
Entry
100185056 CDS
T01056
Name
(RefSeq) WD repeat-containing protein 46-like isoform X2
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100185056
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100185056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_EML
WD40
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_2nd
ASA1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
B-prop_COPA_B_2nd
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_2nd
Beta-prop_VPS8
WD40_RFWD3
PEP5_VPS11_N
DSE1_N
Beta-prop_DCAF4
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
100185056
NCBI-ProteinID:
XP_009859601
Ensembl:
ENSCING00000003393
LinkDB
All DBs
Position
9
Genome browser
AA seq
546 aa
AA seq
DB search
MNKMTTKEEETAENEIAAKDPFYGDAPIPEDRLERYNKGTRIKTKKIRDRKLKGTLDLTE
KKYGSAVKQAARYELLLTEEPGFLETEEGEESWMIDQQSIVKEADIASANKHFQLKLEEF
GPYRIDYTRNGRHLLIGGKRGHVAAFDWMTKRLTCEMNVMESVEDIKWLHTENMFAVAQR
KWLYIYDNQGIEIHCMKRLNDTLRLDFLPYHFLLTTTNRHGYLQYTDISTGNIVSTINTK
GGRLNVMCHNPHNAVVLLGHHNGSISMWSPNQKEPLVRMLCHKTAIRSMAVEKRGNYLAT
AGQDRKMKIFDLRMYKPLHSYQLSTGPSNLCFSQRNLLAATSNNVVEIYNDPCIQVQERP
YLVHKMKLPAEDIAFCPYEDVLGVGAADGFVSLLVPGAGEPNYDAFEANPNRSKQQRREW
EVKALLEKIQPEMISLDPFMLSKVDHVTAERLRKDREEILGYVPDKPAFAPRHKKKGRSK
SGHVEKRKKKVKGEKLRNHIRDEMKTKREMLKKDERKAGRLPHTVTTDGSQVEPAIMKSA
LDRFKK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatgactacgaaagaagaagaaactgcagaaaatgaaattgctgcaaaggat
cctttttatggcgatgccccaatacctgaagacagactggagcgttataacaaaggaacc
cgaattaaaacaaaaaagataagagacagaaagttgaaaggaacacttgatttaactgaa
aaaaaatatggctctgctgttaaacaagcggcaagatatgaacttcttctcaccgaggaa
ccagggtttttggaaacagaggagggtgaggagtcatggatgatcgatcagcaatccatt
gttaaagaagctgacatcgcaagcgcaaataaacattttcaacttaagctggaagagttc
ggaccatatagaattgattacacaagaaatggaagacacttgttgattggtgggaagcgg
ggccacgttgctgcatttgattggatgacgaaacgactcacgtgtgagatgaatgtcatg
gaatcagttgaagacatcaagtggctacacacggagaatatgtttgctgttgcccagcgc
aaatggctttacatatacgataaccaaggcatcgaaatacactgtatgaagagattaaac
gacactctacgtttagactttcttccgtaccatttcttacttacaacaacgaaccggcat
gggtatctacaatacactgacatttcgactggaaatattgtttcaacaatcaatacgaag
ggtggccgactgaacgttatgtgccacaatccacacaacgcagttgtactgctgggtcac
cataatggttctatatctatgtggagtccaaaccaaaaggaaccattagttcgaatgttg
tgccataaaactgctatacggtcaatggcagtagaaaagcgtggaaactacttagctaca
gctgggcaagaccgtaaaatgaagatcttcgacctacgcatgtataagccacttcactcc
taccaactttcaacaggaccttccaacttatgtttcagccaacgtaacctgttggcagcc
acttctaataacgttgttgaaatctacaacgatccttgcatacaggtccaggaacgtccc
tatttagtgcataagatgaagctgccagccgaagacatcgcgttttgtccgtatgaagat
gttttgggagttggagcagctgacggattcgtgagcttactagtaccaggtgctggggaa
ccgaactatgacgcttttgaggcaaatccgaaccgaagtaagcaacagcgaagagagtgg
gaagtgaaagctttactcgagaaaatacaaccggaaatgatctcacttgatccattcatg
ctttcaaaagttgatcacgtgactgccgagaggttacgaaaggacagggaggagatattg
ggttacgtgccagacaagcctgcatttgcaccccgccataagaagaagggccgcagcaaa
tctggtcacgttgagaagcgtaagaagaaagtaaaaggtgaaaaactccgaaaccatatt
cgtgatgagatgaaaacgaaacgcgagatgctgaaaaaagacgagcgtaaagctgggaga
cttccccatacagtgaccactgatggctcacaagttgaacccgcgataatgaaaagcgct
ctcgatcggtttaagaagtga
DBGET
integrated database retrieval system
