Ciona intestinalis (yellow sea squirt): 100185058
Help
Entry
100185058 CDS
T01056
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E-B
KO
K03250
translation initiation factor 3 subunit E
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cin03012
]
100185058
03051 Proteasome [BR:
cin03051
]
100185058
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100185058
Translation factors [BR:
cin03012
]
Eukaryotic type
Initiation factors
eIF-3
100185058
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
100185058
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100185058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
CSN8_PSD8_EIF3K
HTH_36
TPR_3
Motif
Other DBs
NCBI-GeneID:
100185058
NCBI-ProteinID:
XP_002130084
Ensembl:
ENSCING00000001964
LinkDB
All DBs
Position
8:6062906..6067396
Genome browser
AA seq
445 aa
AA seq
DB search
MAQFDLTSKVGCYLDRHLVFPLLEFLSERDIFDERDLHKGKLELLSNTNMVDFAMDVHKT
LYPGEEIPSSLRDKRNNVVSLLKSYTVKTEPIVHIFEQDEVRKQIETTRDGKQLFEYLEK
NHNFKLEDLDTLYDYAKFQYECGNYSGAAEYLYFHRVLVQPDDKRAMDSLWGKLASEILM
QDWDTAWEDLHRLQESIDSNTIASPLQLLQQRTWLIHWSLFVFFNHAKGRDEIIDLFLYQ
PPYLNTIQTMCPWVLRYLTTAVITNKRRRQVLKDLVRVIQQEAYTYRDPVTEFLECLYVH
FDFDKAQEKLRECELVLSNDFFLIACLDDFIENARLFIFETFCRIHQCISIDMLADKLNM
SVDEAERWIVNLIRNARLDAKIDSKMGHVMMGTQAVSSYEQVIEKTKSLGLRTQMLSTNV
ERRLNKERDRTDAVPHWAGGPKENW
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtttgatcttacatctaaagtaggatgttaccttgatcgtcatttagttttc
ccattgcttgaatttctctcggaacgagacattttcgatgagcgggacctacataaaggg
aagcttgagttacttagtaacaccaacatggtggactttgctatggatgtacacaagaca
ttatacccgggagaggaaatcccttcaagccttcgagacaagagaaacaacgttgtcagt
ttgttgaaatcatataccgttaaaactgagccaatagttcatatatttgagcaagatgaa
gtcagaaaacagattgaaacaactcgcgacggcaaacagttgtttgaatatttggaaaaa
aatcacaactttaaactggaagatcttgatacgttgtacgattatgcgaagttccaatac
gagtgtggaaactattcgggagctgcggagtatctctacttccatcgtgtgttggtacaa
ccggacgacaagagagcaatggactctctgtggggaaaactagcgagtgaaatattgatg
caggattgggacacagcgtgggaagatttacaccgcttgcaggaaagcattgactccaac
acaatagcaagccctctgcagttactccagcaaaggacatggctcatacattggtctcta
ttcgttttcttcaaccatgccaaaggaagagatgaaattattgatttgtttctttaccag
ccaccctacttaaacaccatacaaaccatgtgtccatgggtgctacggtatttaactact
gccgttatcactaacaagagaagaagacaggttcttaaagatttggtgcgagtgatccaa
caagaagcatacacatatcgtgaccctgtaactgagtttcttgaatgcctttacgttcac
tttgattttgacaaggcccaagaaaagctacgcgaatgcgaacttgttctttcaaacgat
ttcttcctcatcgcttgtttggacgattttatcgaaaacgctcgactctttatcttcgaa
actttctgtaggattcatcagtgcatcagtattgacatgcttgctgacaagctaaacatg
tccgtggacgaggccgaacgatggatcgtcaacttgatccgtaacgctcgtttggatgca
aagattgattcaaagatggggcatgttatgatggggacgcaagctgtctcatcatatgaa
caagtaattgagaaaacgaagagtttaggtttacgaacccaaatgttgtcgacaaacgtt
gaaagaaggttgaataaagaaagagatcgaacagatgctgttccccactgggcaggaggg
ccaaaagaaaattggtga
DBGET
integrated database retrieval system
