Ciona intestinalis (yellow sea squirt): 100185117
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Entry
100185117 CDS
T01056
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100185117
03036 Chromosome and associated proteins [BR:
cin03036
]
100185117
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100185117
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
100185117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
RhoGEF
PH_19
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
100185117
NCBI-ProteinID:
XP_026690271
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Position
5:complement(1164946..1180442)
Genome browser
AA seq
1353 aa
AA seq
DB search
MSDFKRLFRRQRSEKHMLHEEEQQQSSSGLQTERNAVSNAATSNIGKRNSTFFQSSTGEE
NNVDDHFKEPKSWRKSFRKFRWKKKDPPISMSTDNILTIPESAGDSADMGQPTAQNSPTK
VSKRWSYSPDLSEENVPGARELRGTLERKLSVKLEKDEAQAGDYFGKHRKQNINSLQNNE
ENSLPSSKPCVNNNETDTISEQPGDHENTNKLEVKSDENGNVFQNVENDLPPLQQDQQWQ
SSCTETPEEEEEPYDLGDIDAVLSMVDTKSTLRSLHGQGAVDEGHLWGAASLHATGSFLQ
RSRSDTAFERVAESALESYHYEPEPQQYYEELHEDGTNNKSENAYAYPTPDSDYVTSAGM
EDNISWDSNEFDSSSESEYEDYSQSDVKLRKPPKVDRTSKDLGKEVQKLWFWEKSSFKKR
VSKAPSVEPEPSSFVEIDIPTNRHPLPRLPDPVPPDLTEVQLKRRRIVGTIISSEESYIE
SLQRLEVEYKQTLLEQRPALIGAETVEKIFYKVSNILQCHKLFQIALAAAVMDWDNHECI
GRTFVASFSKSMVLECYSDYINNFNTAMDIVRKTCVRKPQFLAFLRDRQSSSSSRLNLYG
LMLKPVQRFPQFIMIVQDLLKRTPDNHNDKLPLQLALTELETLAERLNRHKAEDEDSAHL
RALIENSNLKLSTHTKDGRVRKLLKQGEMRECEHNVDGLLERVKDSLIVLTNDMLICCSI
TNRRQYHRGGGGTSKDMFKVRWREGLDVVEVTDGPPQAENEVKRETLHSDFILLQKIAKL
VENLQSPHEGLSLPVVDKCIADLEIKIRQAEQMASQPDDSCITVQFPGKLEKVTRTLIFP
YSSQKDEWLDVISKAKLANEPSNLDSWFSANSSDSDSLWKPPLFLRCLSAHTSYNEFQVQ
CAYAFMPVPHVTLLWLSCSASTVLAVVSVYYITDDRVEKVHVMQVESSVQCMEHWNPNNS
IHSVWLGMESGCLLEYSSEGTYRKLNEVTMPTMSTVMIMKAYRNNLYVGLLDGTLAMYTR
PKGTNDLNYVSSIVVGTGPLSCLSPIDGMLWGCSGNDVVTIDMENFKPESTRCLVTDGEQ
LVVNLVTRVGSGLWVTFCEECNLNLYHLDSLERLQEINLSRVIRDFTQDVEPHVSSADKS
MITSLVSGNWQLLAGTSNGLLLVMPLPKLPGSVPKITGPCKVCHHSLCGPLNFLFAPDLP
TSHHNSDLIPEYMAFNEDQPPPIPERDDESVRSSVSKNEIEVETPYEDLSPRSSKYRDPP
LPRPSNLSVHDISSGSNILIEDGSLYENMEVQSIQSPRKSTFIHWNKASSRDCPVIIACG
EGYQRFFSKSTKTSSDQLDSEHQAATILCWKVV
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttaaacgtctgtttcgacgtcagcgctcagagaagcatatgttacatgaa
gaagaacaacaacaatcttcaagtggtttacaaacagaacgaaatgccgtttcaaatgca
gcaaccagtaatattgggaagagaaatagcactttctttcagagctcaactggtgaagaa
aacaatgtagacgatcattttaaagaaccaaaaagttggcggaaatcctttcgcaaattt
cgatggaagaaaaaagatcctccgataagtatgtctactgacaacatccttactatccca
gaatctgccggtgatagtgcggatatgggccaaccaactgcacaaaactctccaacaaaa
gtgagcaagcgttggtcatattctccggatttatctgaggaaaatgttcctggggccaga
gagttaagaggaactttggaaagaaaactaagcgtgaagctagaaaaagatgaagcacaa
gctggtgactactttggaaagcatagaaaacaaaacataaacagccttcaaaataatgaa
gaaaatagtttaccatccagcaaaccttgtgtcaacaataacgaaacagacactatatct
gaacaacctggtgatcatgaaaatacaaacaaattagaagttaaatctgatgaaaatgga
aatgtttttcagaatgtagaaaatgatttacccccattacaacaagatcaacagtggcaa
tcctcatgtacagaaacacctgaagaggaagaagagccgtatgacctaggggatatagat
gcagtcttaagcatggttgacactaaatctacactgaggagtttacatggacaaggtgca
gtagatgaaggtcacttatggggagctgcttcactacatgccactggaagttttctgcaa
cgcagtcgaagtgacacagcatttgagcgtgttgccgaaagtgcgcttgaaagttaccac
tatgaacctgaaccacaacaatattatgaagaactgcatgaagatggaactaataataaa
agtgaaaatgcatatgcttatccaacaccagacagtgactatgtcacctcagctggtatg
gaagataatatatcttgggatagcaatgagtttgattcatcatcggaatcggaatatgaa
gattattctcaatccgatgtaaaacttcggaaaccaccaaaagtagacaggacaagtaaa
gatttggggaaagaagttcaaaaactttggttttgggagaaatcatcatttaagaaaaga
gtcagcaaagctccttctgttgaaccggaaccaagctcctttgttgaaattgacattcca
acgaatcgtcatccgttgccacggttaccggatcctgtacctccggatctaacggaggtt
cagttgaaaagaagaagaatagttggtaccatcatctctagtgaagaatcgtatattgaa
tcattgcaaaggttggaagtggaatacaagcaaactttgctagaacagaggcctgcatta
attggagctgaaactgtggaaaaaatcttctacaaagtctccaacatcctacagtgtcat
aaactctttcaaattgctcttgctgctgcagttatggattgggataaccatgaatgtatt
ggacgcacttttgtggcctccttttccaaatccatggtccttgaatgctacagtgactac
ataaataatttcaacactgccatggacatcgtaaggaaaacttgtgttcggaaaccgcag
ttcctggcatttctacgagaccgacaatcgagcagctcatccaggcttaatctgtatggt
ttgatgttgaaacctgtgcaaaggtttccacagtttataatgattgtgcaggatctattg
aagagaacaccagacaaccacaatgataaacttcccctccaacttgcactcacggagctt
gaaaccttggctgagcgacttaaccgacataaagctgaagatgaggacagtgctcattta
cgtgcgctcattgaaaacagcaatcttaaactatcaacgcacactaaagatggcagggtt
aggaagctgctgaagcaaggagagatgagggaatgtgaacataatgttgatggtttgctg
gaaagagtgaaagattcattgatagttctcaccaatgatatgctcatatgctgctctata
actaacagacgtcagtatcaccgtggtgggggaggtacaagcaaggacatgtttaaagtg
aggtggagggaaggattggatgttgtggaggttacagatggtcctcctcaagcagagaat
gaagtgaaacgtgaaactcttcactcggatttcattcttctgcagaaaatagctaaactt
gtggaaaaccttcagtccccccatgaaggattatcgctacctgttgtagataaatgcata
gcagatcttgagattaaaatacgacaagcagagcagatggcaagccaacctgatgattcg
tgtatcacggttcaattcccgggaaagttggagaaagtcacacgaacattaatattccca
tattcctcacaaaaggatgaatggctcgatgttatttcaaaagctaaacttgctaacgag
ccatcaaacttggatagttggttcagtgcaaattcttctgattcagattcactttggaaa
ccaccgttatttttaagatgtctctcagctcatacctcgtataacgagtttcaggtacaa
tgtgcttatgccttcatgcccgtacctcatgttactctactatggttgtcatgttctgca
agtactgtacttgctgtggtgagtgtatattacatcacagatgacagggtggaaaaagtc
catgttatgcaggttgagagttctgttcaatgtatggagcattggaatcctaataattca
atacattcggtatggttgggcatggaatctggatgtcttctagaatattcatcagaagga
acatacagaaaactgaatgaagttaccatgccaaccatgtccactgtcatgataatgaaa
gcttatcgcaataatttatatgttggtttattggatggcacacttgctatgtataccaga
ccaaaaggaaccaatgatctgaactatgtgtcgtctatagtagttggtacgggccctctg
tcatgtttgtcaccaatagatggaatgttatggggctgttcaggcaatgacgttgttaca
attgatatggaaaattttaaacctgaaagtacacgatgtcttgtaactgatggtgagcag
ttggttgttaacctcgttacaagggtggggtcaggtttgtgggttaccttctgtgaggaa
tgcaacttaaacctctaccatctggattcattagaaagattgcaggaaattaatttatct
cgagtaataagagacttcacacaagatgtagaacctcatgtttcctcagctgataagagc
atgatcacaagtttagtaagtggcaactggcagttgcttgctggtacaagtaacggtctt
ttgttggtgatgcctttacctaaattaccaggatctgtgcctaaaataacaggtccttgc
aaggtttgtcatcatagtttatgtggtcctcttaacttcctcttcgctcctgatctccca
acatcccaccacaacagtgatctcatcccggagtacatggctttcaatgaggatcaacct
cctcccattccagagagggatgatgagtctgtcagatcatccgtctcaaaaaatgagatt
gaagttgaaactccatatgaagatttaagtccacggtcgtcaaaatatcgagatcctcca
ttaccaagaccttccaatctatctgttcatgatattagtagtggaagtaacatactgatc
gaagatggatctttatatgagaatatggaagttcaatcaatacaaagccctagaaagtca
actttcattcactggaacaaagcttcttcacgtgattgtcctgtcataatagcatgtggg
gaggggtaccaaaggtttttttcaaaatcaaccaaaacctccagtgaccagctcgacagt
gagcatcaggcagccaccatactatgctggaaagttgtttga
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