Ciona intestinalis (yellow sea squirt): 100185124
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Entry
100185124 CDS
T01056
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00330
Arginine and proline metabolism
cin00480
Glutathione metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Module
cin_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
100185124
09106 Metabolism of other amino acids
00480 Glutathione metabolism
100185124
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100185124
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
100185124
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
100185124
NCBI-ProteinID:
XP_026696324
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Position
2:complement(4205585..4209112)
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AA seq
434 aa
AA seq
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MDTMHSVELACLEPHISFKPPVYGVAVGDSRKKLANKFVRSQQKLKESDSSFYLGDLGQI
VRNLQMWRKHMPQIRPYYAMKCNPSQPVIQLLASLGVGFDCASGFEIESALKCGVQPDDI
LFAVPCKMSSHIKYACQTGVRTMTFDNADELHKIKRIHPTGKLLLRLRVEYCGIGIKMDD
KFGASMSEAEKLILLCKELKLNLAGICFHPGSGSNSFDPIDRSLQQCRELYDFANLNGID
LKIIDIGGGLVCTESFIKVSFQITTAVNKLFPPETGVKVIAEPGTFLVENAFSFVTNVHG
KALVGDTAKYYIGAGVFTAFNLKFFEEFKRIPENLSREAEKGKYYRTSVYGPTCAGDDCV
VDNIMLPEAQINDWWIFDNMGAYSSLVSLGFNGYMVLKAGFYISQDIWHEIAEKLDPKCP
LFEQYRQHQKLDCE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatgcattctgttgaactggcatgcttagagcctcacataagctttaaacct
cccgtgtatggagtagccgtaggtgacagtaggaagaaactagcaaacaaattcgtacgc
tcacagcaaaaattgaaggagtcagactcttctttttacctcggagaccttggacaaatt
gtacgaaacttgcaaatgtggaggaaacatatgcctcaaatcagaccgtactacgccatg
aagtgcaacccctcacagccagtgatacaactgctagcgtcgttgggtgtgggcttcgat
tgtgccagcgggtttgaaattgaaagtgccttaaaatgcggagttcaaccagatgacatt
ctttttgccgttccatgcaagatgtcttctcatattaagtatgcttgtcaaaccggtgtt
cgtaccatgacttttgacaacgccgacgagctgcacaaaattaaacgaattcacccaact
ggaaagttactcctgcgattacgggtagaatactgtggaataggaataaaaatggatgac
aaatttggcgcatcaatgtcagaagccgagaagctgatattgctgtgcaaagagctgaaa
ttgaatttggctgggatttgttttcaccctggaagtggaagcaattcgtttgacccgatt
gaccgcagtctacaacaatgtagagaattatatgatttcgccaacttgaatggaattgac
ctgaaaatcatcgatataggcggtggactcgtttgtaccgagagttttattaaggttagt
ttccaaattactactgctgttaacaagctgtttccgccggaaaccggggtaaaagtgatt
gctgagcccggcacgtttctcgtggaaaatgcattctccttcgtaacaaatgtgcatggt
aaagcgctcgttggtgacaccgcgaagtattacataggagctggagtttttacagcattt
aatttaaagtttttcgaggaatttaaaagaatcccagaaaacctgtcccgcgaggcagaa
aaaggtaaatattacaggacaagtgtatacggaccgacttgtgcaggagacgattgtgtc
gtggacaatattatgctgccggaagctcagattaatgactggtggatctttgacaacatg
ggagcttattcgtcgttagtaagccttggttttaatggttacatggttttaaaggctggg
ttttacatctcgcaagatatatggcatgaaatcgctgaaaaattagaccccaagtgtcca
ttatttgagcagtaccggcaacatcagaaactggactgtgaataa
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