Ciona intestinalis (yellow sea squirt): 100185133
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Entry
100185133 CDS
T01056
Name
(RefSeq) nck-associated protein 1 isoform X1
KO
K05750
NCK-associated protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
PSF1_C
Motif
Other DBs
NCBI-GeneID:
100185133
NCBI-ProteinID:
XP_002124958
Ensembl:
ENSCING00000003184
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MRSASRSIMARVVPGQQKLAEKLIILNNRAVGMLTRIYNIKKACSDSRSKPTYLTDKALE
SGIKFIVRKFPQVDTRNNQNQLAGVNNAKNEILKGLSLYYHTFVDVLEFKDHFYELLATF
DSLSIYLDLTVNYDLTSHFLELIVRYASLMILVSRIDDRKAIIGLYDHAHDMIHGKMEKD
YARLGQMIVDFENPLKKLVEDFGAHSRSIQNAVMSLLQIYPQRNSGADVWRSSSLFSVIA
TPAQMLNPAVTDKMQCEYISVESLERWIYFGYLLCHTSMVSSQEATAGLWRPVLQSNFCL
TLFRDEVIMLHRSAEEVFSSIKGYNKKISEVKECRDMAAQQAGKIHKDKRKYLRSSMKEF
VAVLTDQPGLLGPKTLFVFMALSYARDEVMWLARNSSNFIKKVNAEDFVDRHLGELLFYM
EEIRHLVRRYDEVVQRYYVQYMYGYDSVILNEAVQNLSVCPEDESVIMTSIVNTMTSLSI
KQVEQKELFDFRAMRLDWFRLQAYTSVNKAALSLKDNVVLARLMNTISFHCKVVDEIDEV
LHETSDLSNFCFYQNFYATAFKRCIELPAQSRYSIIFPLICGHFVTAVGDFCPEERSHVR
DRALNCVNQFLEEIAKEARNLLFNIASEQSQLAENLLPKNAAVMMKQGLVKKGKGKKHTK
GNVQETTKPGLESKRKDRLYVTRMDKYHMALAEVCSAINYRANFVVWEHTFAPKEYLTAH
LESRFAKHLVSMTFNKETSEIAKPSELLCKLRAYMATLQTVENYVHLDVTRIFNSVLLQQ
SQMVDSHGETTITTLYTQWYLEVMLRQVSGGSTVFSEMRRHFVKVPNYADSSSSNQPIIN
AEEYSNINELKALAQIIGPYGMKFLNESLVWHIASQITELKKSVVDNMDTLTGLRTNFDK
PEQMAMLYRKLEGVENFLLRMTIIGVIFSFRDVAQEALNDVLQHRIPFLLASIADFKEHI
PKETDIKVTININELASAAGIPCEIDPTLCAALSAQKIENPDEEYKVACLLMVFLAVDIP
VLARNERSVFLPELVAHGNNCHCLARAVNHVAAALFTVHRGTVEDRLKEFLALASSSLLK
LGQETDKVSTRSRESVYLLLERIIHFSPFLTMDLLESCFPYVLLRNSYHAVRRNQPAMTG
LSRNESISATVA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcagcgtcgcgtagcataatggcgagggtggtaccaggacagcagaagttagct
gaaaagctgattatattgaataaccgtgctgttggcatgctgacaaggatatacaacatt
aagaaagcatgcagtgacagcagatcaaagccaacatatttaacggacaaggcattggaa
tctgggattaagtttattgttcgaaagtttccacaagtggacacgcggaataaccagaat
caacttgctggtgtaaataatgcgaagaatgaaattcttaaaggactttcattatactac
cacacgtttgttgatgtattggaattcaaggatcacttctatgagctccttgctacattc
gacagtctttctatatacttagatttgactgtcaattatgacttgacgtcacattttctt
gaactgatcgttcgttacgcttcactgatgatacttgtttcgcgcatcgacgaccgcaaa
gcaatcatcggactttatgatcatgctcatgatatgattcatgggaaaatggagaaggat
tatgcacgtcttggtcaaatgatcgtggattttgaaaatccactcaaaaagttggtggaa
gattttggagctcacagtagatccattcagaatgcagtaatgtcacttcttcaaatttat
ccacaaagaaacagtggtgcagatgtatggagatcatcatccttgttcagtgtaattgct
acaccagcacagatgcttaaccctgctgttactgataagatgcaatgtgaatatataagc
gttgagtcacttgaacgttggatttatttcggatacttgttgtgccacacatccatggtg
tcaagccaggaagccacagcaggtttatggagaccagtactacagtccaacttctgtttg
actttattccgagatgaagtgatcatgttgcacagaagtgctgaggaagttttctcatca
attaaaggttacaacaagaagatatcagaagtgaaggaatgtcgagatatggcagcacag
caggctggtaagatccacaaagataaacgaaagtatcttcgctcatccatgaaggaattt
gttgcagttttaacggaccaacctggtttgcttggaccaaaaaccttatttgtgttcatg
gcgttatcatatgctcgtgatgaggtgatgtggttagccagaaactcaagtaacttcatc
aagaaagtgaacgcagaagactttgttgacaggcaccttggtgaactgttattctacatg
gaagaaattcgccatcttgtccgtcgatatgatgaagtggtgcagcgatattacgtgcag
tacatgtatggatacgactccgttattctgaatgaagctgttcaaaacttatcggtgtgt
cctgaagatgaatccgtaattatgacatcaatagtgaacactatgacatcactgagcata
aagcaagttgaacagaaggagttgtttgattttcgtgccatgcgtcttgactggttccga
ctacaggcctacacaagtgtaaacaaagctgcgttaagtttaaaggacaatgttgttctc
gctagattaatgaacacgatatctttccattgtaaagtagtggatgagatagatgaggtg
ttacatgaaacgtcggacctttccaatttctgtttctaccaaaacttttacgcgactgca
ttcaaacgctgcatcgagcttcctgcccagtctcgctactccatcattttccctctcatc
tgcggacacttcgtcaccgctgtcggagacttctgtccggaggagcgctcccatgtccgg
gaccgagctcttaactgcgtcaatcagttcttggaagagattgcgaaagaagcgaggaat
cttctctttaacatcgcatcagagcaaagccagttggcggaaaatttactgccgaaaaac
gcagctgtgatgatgaaacaagggttggtaaagaaaggtaaaggaaagaaacataccaag
ggtaatgtacaagaaacgactaaacctggactggaaagtaaaagaaaggacagattatat
gttacaagaatggacaaataccacatggcacttgcagaagtttgcagcgcaattaactac
agagctaactttgttgtatgggaacatacatttgcccccaaggagtatttgacggctcat
ttagaaagtcgttttgctaaacatttagtttccatgacatttaacaaggaaacaagtgaa
attgcgaaaccgagtgaactattgtgcaagttacgagcttatatggctactttgcaaact
gtggagaactatgttcatctggatgttactcgaatattcaacagtgtattgctgcaacaa
agtcagatggttgacagccatggtgaaacaaccatcactacattgtatacgcaatggtac
cttgaagtgatgttgcgacaagttagtgggggcagtactgttttctcggagatgcgtcga
cattttgttaaggtgccaaattatgctgactcatcatctagcaaccaaccaatcataaac
gccgaggagtattcaaatatcaacgaattgaaagcacttgcccagattattggaccttat
gggatgaagtttctgaatgaaagtttggtgtggcatattgctagtcagatcactgaactt
aagaaatcagtggtggacaacatggacacactaacagggctgcggactaactttgataag
cctgaacagatggctatgctttacaggaagctggagggtgtggaaaacttcttgctccga
atgacgatcattggcgtcattttctcgttccgtgatgttgctcaagaagcattgaacgat
gtgttacaacatcgtattccattccttctcgcttctattgctgatttcaaggaacacata
ccaaaggaaactgatattaaggtgacaataaacataaacgagcttgcatcagctgcaggg
attccatgtgagatcgatccaacattgtgtgcagctctatctgcacagaagattgagaat
cctgacgaggaatacaaagtagcttgtttgttgatggtgtttcttgctgtggacattcct
gttctcgctcgtaacgagagatcggttttcctccccgagctcgttgcccacggtaacaac
tgccattgtttggcgcgtgcagtgaaccacgtagctgctgcgctcttcacggttcatcga
ggaaccgtggaagatcgactcaaggagtttcttgctcttgcatcatcaagtctcctcaag
ttgggacaggagacggacaaagtgagcacgaggagcagggagtcggtttatctcctcctt
gagaggatcatccacttctctcccttcctcaccatggacctcctcgagtcttgctttccg
tatgttttgctgcgaaactcgtaccacgctgtccgtcgcaaccaaccagccatgactggg
ctttcaagaaacgaatcaatatctgcgaccgtcgcataa
DBGET
integrated database retrieval system
