Ciona intestinalis (yellow sea squirt): 100185171 Help Entry 100185171         CDS       T01056                                  Name (RefSeq) midasin   KO K14572   midasin Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03008   Ribosome biogenesis in eukaryotes Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     100185171  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:cin03009]     100185171 Ribosome biogenesis [BR:cin03009]  Eukaryotic type   Pre-60S particles    Other pre-60S particles     100185171 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_5 AAA_lid_7 AAA_3 AAA_lid_5 AAA_22 AAA AAA_16 AAA_7 Sigma54_activat nSTAND3 AAA_14 TsaE AAA_18 AAA_6 Sigma54_activ_2 AAA_30 MDN1_4th ABC_tran bpMoxR AAA_28 AAA_2 Zeta_toxin RuvB_N Mg_chelatase Rad17 RsgA_GTPase SRP54 nSTAND1 Roc Motif Other DBs NCBI-GeneID:  100185171 NCBI-ProteinID:  XP_026692806 LinkDB All DBs Position 12:2315995..2362022 Genome browser AA seq 2820 aa AA seqDB search MEHFHADIHNALKRIVLLNPLAQKTLQKYLAKQIWTSNDRAAVLQNLSKVLLKSSESDTL QICHLLGPIAVDLLLRISMSNGQCENHPDTHERLCVMLGWLCKSGTSSVHEFALSYLRDN GPPFKRLNDIDEVTSEKSKRTKVSLDGVEELIEATYALVTKFPELLESDWCWSRLADYLH NNYSHITSRCHQHLIKILSNVVGLCGPNQCKNILEIKNNGLSAINGEENLEVQCSVTTPE AVLTHTRHAIVSKDLSENLTSICGVLVLKQPGIAGEFDLVMTDGLKDQLQKLAVAISLKK SILLEGPVGCGKTALIENVAKATGRAKPPKFSKIQLSDDTDSKTLTGTYVCTAVPGEFLW QPGLLIQACKDGDWLLLEDVDRAPMDVISMLLPLVESRRLSIPGRPDQNNAVSPDFRLFM TRRVTMGTSFVGHLGLGMLSKHVNVISMEAISANDLKQIMLHKYPKLGNVAEKLLTIYLR LTEHESANISMTKRKLSTRDLLKWCHRVADHINETSAGIGEFVALSAIDCLVASSWKPES RISMIETICAELNIGTEKAKYFSDAYRPEVEIDRAIFKVGKTSLPRLKQEIVTGLQRKQL FAHTRHSCVLLERVAGCVETSEPVLLVGETGVGKTSVLQYLAQETGHRLHVVNMSQQSSS GDLLGGFKPAQIRHFVAPVREKFEEIFPKTFCRNQNMKFLSHIQTCYSNKRYNDLLKLMS HVCDAAFKRLSSLDEEENLKLLSSWKQLTFDLEELRLKVKSDSAIAFNFVEGELARCLRL GEWILLDEINLAPSDALECLSGVLESEAGSIVLLERGDSKPVERHKNFRLFAAMNPATDV GKRNLSDGIRNRFTEFFVDEPSNHKDLADIVDFYLDRNISGTSVVEGVVTFYNEVRKLAV GKLVDGSGRKPHYSLRTLCRALNYVKHNANMTLHVALYEGFCMSFSTALDKPSSSIVVGL IGKHIVGKNKLKSVLNRTMPKPDYECLHVEKYYIRRGALAVSKDPNYIMTPSIRENLIQL SRPVSYGKHPILIEGATSTGKTSLITYLGRLTGNRVVRINNHEHTDIQEYVGSYASDSEG RLVFQDGPLVTAMREGHWVILDELNLAPTDILEALNRVLDDNREIFITETQEVVRAHPRF TLFATQNPPGSYGGRKVLSRAFRNRFVELHFNEIPTKELETILHERCHLAPAHCKKLVKV MQDLQARRRASGLFAGKHGFITLRDLFRWAERHRKYERDACDFYDWEQHLVDDGFLLLAG RVRKLEEEKVIEEVLSKYIGRKVDQENLFGTENVESIIKRYDWPEGFDHVVWTQPMRRLF VTLERALRFNEPVLLVGETGGGKTTACQLMAAMVKKKLSIVNCHANTEAADFIGGLRPTR NQSKLDSDKRGLFEWVDGPLVASMRGGSYILVDEISLADDSVLERLNSVLEPERTLVIPD KISMSTSISDNDGSFVVADTGFQFMSTMNPGGDFGKKELSPALRNRMTEIWCSGVNEHCD LINIVQHNLKLNHGNGIDCDKTYASLVVEFVEWFKTTMFGKRFVISVRDLLTWASFMRTS SGDLDLPSSFLHAACLVYIDGLGSGLSAGASKQSHDIHSECLRFVLKQLRECGQLDGMSP TMLQWVEGEIQSTGPSSKIHNTEKTFGIEPFSITKGPADFSGDFQFTFNAPTTSTNALRV LRALQLPRPILLEGSPGGGKTSLVAAIAKYSGHELVRINLSEQTDASDLFGADLPVEGGS GGEFSWRDGPLLSAMKKGHWVVLDELNLASQSVLESLNSVFDHRGELYVPELARSFLVNR DQTKIFACQNPVHEGGGRRGLPKSFLNRFTQVYVRGLAGEDMEFILNNSFPQIPPDVMKL MVKFNQQVNESVVVQRSWGHRGSPWEFNLRDITRWCQLVVVDLTRGLPLDVAKHVYTVYC ARLRSKDDRQKMMSMFRSIFGIEVYEPSGRFHISSRILQVGGSTIERTGEYFADSSDDFH ILPSMLKSAESLITGINQKWPCIVTGASGSGKSRLVKTVAKLAGRKLRILSTNSEMDAVE LLGGFEQHDIVKNLMEFVINVKRRVVTDCQDCISRLPAINQPKEFNKLMLKLKFLLKKIE NLNAMIKLVDSFKVNDKENRFVELENKISMVLGTSMKNSEYKELWAEWQNLKLSEKSHGS YEWMDSVLVHALKNGEWLLIDGANFCSASVLDRMNALLEPQGVLAITERGIVQGEVPTIT PHPDFRLIFALDPTHGDLSRAMRNRCLEISLLPLDVVAEQNMETVLMESEVTTIAQAKSL NLTEFKICEKIVEDWREKNNGGTQNLSDGEMLKILDSTLEEVRRGLYQDFPQVQISGNCL ILILKDQYFVCLTAIHNLWLEVYHLNIIMTSQLLECLSHDFVDDALDFIGVHSDRMCQTS LLVIRALEFLFEDKNGINQSWLTAVSHESTIHMIMMILVKMITSQRDKEADLKCRLSTSI LRLLTKISTHVETARMIKQTNILPELCLALSSAYVDNKKKWLEVYHLNIIMTSQLLECLS HDFVDDALDFIGVHSDRMCQSLSLIRVNQSMTLLSEVNHTTALLSLLSRDFTHEWKFKIR NSFECVVERVLVAVHSCTALLLHPRLLNVSIKATRKKQKLSASTPVKITKQTSLKSPEVD TNLPPDDVKEQMYSILGNLLSFLKNLSPDLSQLVMDLETCAEEFPQLVTMNFSTPTVDHE ADVSFGTLLSATNMSLTALHKIEPVDTKLTFHASLTFVSEISLYLIISQCLLLLKLKDLP TRSKQILRRELSDELASCVKSARRHLRHSSSSQSPGKSPSGTPPKGILELVTAFVKHIMT NT seq 8463 nt NT seq  +upstreamnt  +downstreamnt atggaacatttccatgcagatatacacaatgctcttaagaggattgtgttactaaaccca ttagcacagaaaacgttgcaaaagtatctcgcaaaacagatatggacatctaacgaccgt gcagcagttcttcaaaatctttccaaagttttattgaaaagcagcgaatcggatactttg caaatttgccatttgcttggaccaattgctgtagatttgttgctcaggatttctatgtca aatgggcaatgtgagaatcatcctgatacgcatgagcgattatgtgtcatgcttggttgg ttatgcaaatcaggaacatcgtcagtgcatgaatttgcattgtcatacttgcgtgacaat ggaccgcctttcaaacgactgaatgatattgacgaggttacttccgagaagtcgaaacgt accaaagtatcactggatggcgtagaagagctaatagaagcgacgtatgcacttgttacg aaatttccggaacttcttgaatccgattggtgctggtcacgcttggctgattatctgcat aataattattctcacatcacttcacgctgccatcaacatcttataaagattttgtctaat gtagttgggctttgtggacccaaccaatgtaaaaatatactggagattaaaaacaatggg ctcagtgcaataaacggagaagagaatcttgaagttcaatgtagcgtaacaacaccagaa gctgtgttgactcacacacgtcatgccattgtctctaaagatttatcggaaaatttgact tcaatttgtggagtgttggttttgaaacaaccgggaattgctggtgaatttgatctggtt atgactgacgggttaaaagatcaactgcaaaaacttgccgtcgcaatttcactgaaaaag tcaattttacttgaaggtccagtaggttgtggcaaaactgcattaatagaaaatgtcgct aaagctacaggtcgagcaaaacctccaaagttttctaagatccaactaagtgatgataca gacagtaagacattgacaggaacttacgtgtgtactgctgttccaggtgagtttttatgg caacctgggttgcttattcaagcgtgtaaagatggggattggttgttgttagaagacgtg gatcgcgccccaatggatgtcatctccatgcttctgccgctcgtcgaatctcgccgactc agcattcctggtcggcccgatcaaaataacgctgtgtcgccggattttcgacttttcatg actcgtcgtgttactatgggaacctcgtttgtcggccatcttggtttgggaatgttatcg aaacatgttaatgtgatttctatggaagctatatcggcaaacgaccttaaacagattatg ctgcacaagtatcctaagttgggaaatgtcgcggaaaaactgctgacaatttacttgagg ctgacggagcacgagtcagcaaatatttccatgactaagcgaaaattgtcgactagggat ttgttaaaatggtgtcaccgtgtggcagaccacatcaacgaaacatcagctggaattggg gaatttgttgcgttatctgcgatcgattgtctcgtagcgtcatcttggaaaccggaatca aggatttctatgattgaaacaatttgcgctgaattaaacatcggaactgagaaggcgaaa tatttcagcgatgcttatcgacctgaagttgaaatcgatcgcgcaatttttaaagttggt aaaacatctttaccacgactgaagcaagaaatagtaactggattgcaacgtaaacaactg tttgcacatacgagacattcctgcgttctgcttgagcgagtagctggctgtgttgagacg agcgaaccagtgttgctcgttggtgaaactggggttggaaaaacatcagtgttgcaatac cttgctcaagaaactggtcaccgcctccacgtagtaaacatgtcacaacaatcgagttcc ggagatcttctcggaggattcaaaccagctcagattcgtcactttgtggcgccagtgagg gaaaagtttgaggagatttttccgaaaactttttgtcgaaatcaaaacatgaagtttctt tctcacatacaaacttgttacagcaataaaaggtacaatgatcttcttaaactgatgtcg catgtttgtgatgctgctttcaaaagactttcaagtttggatgaagaagaaaatttaaag ttgttatcgtcatggaaacaattgacctttgacctagaagaactgaggttgaaggtgaaa tcggattctgcgattgcgtttaattttgttgaaggtgagctagcacgatgtttacgactc ggagaatggattttattggacgaaattaacctcgccccctctgatgccctcgagtgtttg agtggtgtgcttgagtccgaggctgggtcaattgttttgctcgaacgtggggattcaaaa cctgtggaacgacataaaaatttcagattatttgctgccatgaatccagcaactgatgtt gggaagagaaatctatcagatgggattcgaaaccgatttaccgagttctttgttgacgag ccaagcaatcataaagatcttgctgatatagtggatttctatttagatagaaatatttct ggcacttctgtggtggagggagttgtaactttttacaacgaagtaagaaagttggcggtt ggcaagttggttgacggctccggacgcaagccgcattattcacttcgaactttatgcaga gctttaaactacgtgaagcataacgcaaatatgacactacatgtcgcgctatatgagggt ttctgtatgtcgttttcaacagccctggataaaccatcaagttctatagtagttggcctc attggaaaacatattgtcggcaagaataaactgaaatcagttttaaatcgaacaatgcca aaaccagattatgaatgtttgcatgtggaaaaatattatatacgtcgtggtgctctcgct gtatctaaagaccctaactatataatgaccccttcaatacgagaaaatttaatacaattg tcaagaccggtatcttatggaaaacatcccattctaattgaaggagcgacctcgacaggg aagacaagtttaataacatatctaggtcgtcttacagggaacagagttgttcggatcaac aaccatgaacatactgatatacaggaatatgttggatcatatgcaagtgatagtgaaggt cgactcgtttttcaagatggccctctagtgacagcgatgagagagggacactgggtgatc ctcgatgaactaaatcttgcaccaactgacatcctggaggcgctgaaccgtgtccttgat gataatcgcgagatttttatcaccgagacacaggaagtagttcgcgcacatccaaggttc accctgttcgccacccagaaccctccaggttcatatgggggccgtaaggtactttcccgg gcattccgcaacagatttgtggagttgcatttcaatgaaatcccgacaaaggaattagaa accatcttacacgaacgatgtcaccttgcgcctgctcattgcaaaaaacttgttaaagtc atgcaagatctacaggcaagaagaagagcttctggtttatttgctggaaaacatggattt ataactttgcgtgatttgtttagatgggctgagagacataggaaatatgagcgagatgct tgtgatttctatgactgggagcaacacctagtggacgacgggtttcttcttttagctgga cgagttcggaaattggaagaggaaaaggtaatagaagaagttttatcaaagtatatcggt cgtaaagttgaccaggaaaacttgtttgggaccgaaaatgtagaaagtataatcaagcga tatgattggccagaaggttttgatcatgtggtctggactcaaccaatgagaagattgttc gtcacacttgagcgagcgttacggttcaacgaacctgtgttgttagttggtgaaactggt ggcgggaaaacaacggcgtgccaacttatggctgccatggttaaaaagaagttgtccatt gtcaattgtcacgcaaatactgaagccgcggattttatcggaggtttgcgtccgacgaga aatcagtcaaaattggattctgacaaaaggggattgtttgaatgggtggatggcccccta gtggccagtatgcggggtggatcgtacattcttgttgacgagatttcgctcgccgatgat tctgtgttggagagattgaacagcgtacttgaaccagagagaactttggttattccggat aaaatatctatgtctacatcaatcagtgacaacgatgggtcctttgttgtcgctgacacg ggatttcaatttatgtcgacgatgaatccgggaggagactttgggaagaaagagttgtcg ccagctttgcgaaatcgaatgaccgagatttggtgcagcggcgtcaatgagcattgtgac ctcatcaatattgttcaacacaatctaaaacttaatcacggtaatggcattgattgtgat aaaacatacgcttcgctcgtggttgaatttgtggagtggtttaaaacaactatgtttgga aaaagatttgtaatttctgttcgtgaccttttgacctgggccagcttcatgaggacatct agtggtgaccttgatcttccgtcctcgttcctacacgcagcgtgccttgtgtatattgat ggtcttgggtcaggtttatcggctggagcttccaaacaaagtcatgacatccattctgaa tgtcttcgctttgtactgaaacaattaagggagtgcgggcaactagatggaatgtccccc accatgctacaatgggtggaaggggaaattcaatctactggtccaagtagcaagattcat aacacggaaaaaacttttggaattgaaccgttttcaattacaaaaggtccagctgatttt agcggcgattttcaatttacatttaacgccccaacgacttcaactaacgctcttcgcgtt ttacgagctttgcaacttccgagacctatcttgctcgagggctcccctggtgggggaaaa acaagcttggttgcagcaattgcgaaatactccggacatgaactcgtcagaattaatttg tctgagcaaacggacgcctcggacttgttcggcgctgacttgccagtagagggcggtagt gggggtgagttttcatggagagacggaccgttgctatcggcgatgaagaaaggccactgg gtggtgctagacgagttaaatctcgcgtcacagtccgttcttgaaagtttgaacagcgtg tttgaccaccggggggagttgtacgtaccggagctagctcgtagcttcttagtgaaccgt gaccaaacgaaaatcttcgcttgccagaacccggttcatgagggtgggggtagaaggggg ctccctaaaagcttcctgaaccgatttacccaggtctatgtgcgaggattggctggtgaa gacatggaatttattttgaacaattcctttccacaaattccaccagatgtcatgaaattg atggtgaagtttaatcaacaggtaaatgaatcagtcgtggtccaaaggtcatggggtcac cgggggtcaccttgggagttcaatctgagagatataactcgctggtgccagctagtggtt gttgatttgacaagaggcttaccactggatgtcgccaagcatgtgtacacagtttactgc gcaagactacgttctaaagatgacagacaaaagatgatgtctatgttccgttccatattt ggtattgaagtttacgaaccttcgggaaggtttcatatttcgtctcgtattcttcaggtt gggggaagcaccattgaaaggactggagaatatttcgctgactcatcagacgactttcac attttgccgagcatgttaaaaagtgcagagtcattaattacagggattaatcagaaatgg ccttgtattgtgactggcgcttctggttccgggaaatcacgactcgtgaaaactgtcgcg aagctcgctggtcgcaaacttcgaattttgtcgactaatagtgaaatggatgccgtggaa ttactcggcggttttgagcagcatgacatcgtcaaaaatttgatggaatttgtgataaat gttaaaagaagagttgttacggattgtcaggattgtatttcccgtcttcctgccataaat caaccaaaggaattcaacaagttgatgttgaaattgaaatttctccttaagaaaattgag aatctcaacgcaatgattaaactggttgattcgtttaaagtaaacgacaaggaaaatcgt ttcgttgaattggaaaataagatttctatggtgcttgggacctctatgaaaaactcagaa tataaggaactttgggcagagtggcaaaatttgaaacttagtgaaaaatcccacggttca tatgagtggatggacagtgtgttggtacatgccttgaaaaatggggagtggttgttgata gatggcgccaacttctgttcagcgtcagttctcgatcgaatgaacgcgctacttgagcca caaggtgtcctcgctatcacagaacgtggtattgtacaaggggaagtacccactatcacc cctcacccagattttagattgatttttgctttggacccaacacatggagatctttcaaga gcgatgcgtaaccgatgccttgagatatctcttctcccactagatgtggttgctgagcag aacatggaaacagtattaatggagagtgaggtcaccacaatcgctcaagcgaagagtttg aacttaacagaattcaaaatttgcgaaaaaattgtcgaagattggagggaaaaaaataat gggggtacgcagaatctttcggacggtgaaatgttaaaaatattggattcaacattagaa gaagtaagaagggggctttaccaggattttccgcaagtacagatttctggcaattgtttg attttgatcttaaaggaccaatattttgtctgccttacagcaatacataatctgtggctt gaagtttaccatttgaacattattatgacatcacaattactggaatgtttgtcacatgac tttgtggatgacgcgcttgacttcatcggagtacacagcgatcgaatgtgccagacctca ttgttggtcatacgagcgttggaatttctttttgaagataaaaacgggatcaaccaatca tggcttactgctgtatcacatgaatcaaccattcatatgattatgatgatcctcgtgaag atgatcacatcacaacgtgataaggaagcagatcttaaatgtcggctctctacctccatc ttacggttgctaactaaaatttccacacatgtcgaaactgcgcgcatgattaaacagacc aacattctgcctgaattgtgtctagcgctatctagtgcttacgttgacaacaaaaaaaag tggcttgaagtttaccatttgaacattattatgacatcacaattactggaatgtttgtca catgactttgtggatgacgcgcttgacttcatcggagtacacagcgatcgaatgtgccag agtttgtcgttaattcgcgtgaaccagagcatgacgttgctttctgaggtcaaccacacg acggcgctcttgagtttgttgtcacgtgacttcacgcatgagtggaaattcaagattcga aactcgttcgagtgtgtggtggagcgtgtcttagttgctgttcattcatgcacggcgctt ctgctgcacccgagactattgaatgtttccataaaagcgactcgaaaaaagcaaaaacta tcagcatcaacccctgtgaaaataaccaagcaaacatcacttaaatcaccggaagttgac acaaacttgccaccggatgacgtgaaagagcagatgtattcaattctcggaaatttactt tcgtttctcaagaatctttcaccagatttatctcaactagtgatggaccttgaaacatgc gcggaggagtttccacaattagtcacgatgaatttcagcacaccaactgtcgatcacgag gctgatgttagttttgggactctgcttagtgcaacaaacatgtcacttactgcattacat aagattgaaccggttgacaccaaactgacattccacgcttcattgacttttgtttctgaa atttctctttacttgattatctcgcaatgcttgttgttgttgaaactgaaagatctgcca accagaagcaagcaaattttacggagggaactttcagatgaattggcatcttgtgtgaaa agcgctcgacgtcacctacgtcattcatcgtcctcacaatctcccgggaaatccccctcc ggtacaccaccgaaaggaattctagaattagtcactgccttcgtaaagcatattatgacg taa

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