Ciona intestinalis (yellow sea squirt): 100185330
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Entry
100185330 CDS
T01056
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100185330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100185330
03036 Chromosome and associated proteins [BR:
cin03036
]
100185330
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100185330
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100185330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Motif
Other DBs
NCBI-GeneID:
100185330
NCBI-ProteinID:
XP_026690792
Ensembl:
ENSCING00000003558
LinkDB
All DBs
Position
7:complement(1368337..1387644)
Genome browser
AA seq
906 aa
AA seq
DB search
MQQAWLLRTVAIELYSLSLKRQRVNAERILKVLFSSDSCNLIGSTLNASRLLNQSSDVTN
LTTRALAGDVSVTQHSMSVLDASASVAMSSQRKELSKMLKTFGVLDLVQEFPNPLTLEQF
IPSIVEQAISSCEATNEHGIIQCDVKALHNILEASCTTLSSSEDANRKQLAIADMQNILQ
NAMDRNMTRETVHAKLSFLTGWRHTLEVALTACPVDLLSKEARQEVLLSTLQHLVNTARS
SDATQELTSPIAGIVLMIIVQIRASFFGDADPNITLDGSISAYETKQEISLASVAPLQVV
VRGAMEWLLQAGLPAKVRTHLYTALLYYLQLCQKPNDSDKKKSRHGNLMLLASSEDIYAR
LNRDNLQLLQEYGDTFMDLLCKDASSGYGVCRVLAFACLDAIHQIDTHQTWLQYMVKNGY
MAHIAHSFSQEDASLQESLDPNQDTPRSVFIYEQKMALLCSIAETQGGARAIIDCGILTQ
LAECNFLQMRPESNDSELGSSALSRYQQLLFPTFHLCSALLATLGGQSHHEVSALVLQFL
LSHVNPIVNSVLKSQAIHTDIQALTELKLLTSILSETAGQDFSDPTMYPSIPTPVLLDIQ
GHLMRIQRQMLFLLPSFFLTDQLLKDLETKSKEEGSDFGQILTLIHEIGSNILTYARVVV
AARSPDADSTFLLFSPSLAESSFGNPGYDDHRRQPALGALMRILHTCVSRFIAQRDSMSQ
QEWKISNIETLSSQDLNEVINGGTPQTMSRAQEKKVAEFILKQSVQQKTHLLECLYNVLE
NCLLLLWQHVDYYVLRAVPTETANANILFPSRNQSDTHQRSLRKLQEFSESFVGHSSQTE
FGSNFSTPKSAGLRKETIVQLKMELASSLPDHFLKKLTNIEIPTKGTAASFMQPIVRRLQ
HIVKLH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagcatggttattaaggacagttgctatcgagttatattcactctcgttgaaa
cgacaacgtgtgaatgcagagaggatactgaaggtactgttttcttccgattcatgcaat
ctgattggctcaactttaaacgcatcgcgtttgcttaaccaatcaagcgacgtgacaaac
ttaacaacaagagcgctcgctggagatgtttcagtaacccaacactcgatgtcagtgttg
gacgcctcagcgtcggtagcaatgtcttcgcaacgaaaagaattgtcaaaaatgctgaaa
accttcggtgtattggatctagtgcaggaattcccgaacccgttaaccttggaacaattc
attccttcaattgtagaacaagccatcagttcatgtgaagcaaccaacgaacatgggatc
atacaatgtgatgtcaaggctctacacaatatactagaagccagctgtactactttgtcc
agctcagaggatgcaaacagaaaacaacttgccattgcagacatgcagaatattcttcaa
aatgcgatggaccgaaacatgacaagagaaaccgttcatgcgaagctttcatttctcact
gggtggcgccacacacttgaagttgcgttaacagcatgtccggttgatctgttaagcaag
gaagcaagacaagaggtgcttctctccacattacaacatctggtcaacactgccagaagc
agtgatgccacgcaggaattaacttccccaattgctggcatcgtgctcatgatcattgta
caaatacgagccagtttttttggtgatgctgacccaaatataaccctggatggaagtatt
tctgcttatgaaacaaaacaagaaatatcattggccagtgttgcaccattacaggttgta
gtaaggggtgcaatggaatggttgctacaagcaggcttaccagcgaaagttcgtacccat
ttatacacggctctgctctactatttacaactgtgccaaaagccgaatgactccgataaa
aaaaagtcacgtcatggcaacctaatgttactcgcgtcaagtgaggacatctatgctcgt
ttgaatcgtgacaacctccaattactacaagaatatggagacactttcatggacttgcta
tgcaaggatgcctccagtggttatggtgtgtgtagggtgctagcgttcgcttgcttagat
gcaatccatcagattgacacacatcagacttggttacaatacatggtgaagaatggatac
atggcacatattgcacacagctttagccaggaagatgcctctctccaggagtccctagat
cccaaccaagatactcctcgctctgtgttcatttatgaacagaagatggcgctgttgtgc
tcaatagccgagacacaaggtggagctagagcgataattgactgcggtattcttactcaa
cttgcggaatgcaacttcctacaaatgagaccggaatcaaatgacagtgaattaggttca
agtgcattatccagataccaacaacttctgttcccaacattccatctctgctctgctcta
cttgctactctaggtggacagtcccaccatgaagtgagtgctttggttcttcaattcctc
ctgtcacatgttaacccaatagtgaacagtgttctcaagtcacaagcaatacacacagat
atacaggcactcactgagttaaagttactgaccagtatactgagtgaaactgctggtcag
gatttctctgatccaaccatgtacccttccataccaacccctgttttgctggatattcaa
ggtcaccttatgagaattcagagacagatgctctttcttcttccaagcttcttcctcaca
gatcagctccttaaagatcttgaaacaaagagcaaggaagagggaagtgactttgggcag
attctcacacttattcatgaaattggttcaaatatattaacatacgcacgggtggttgta
gctgccaggtcaccagacgctgactccacatttttgcttttctcaccgagtcttgctgag
tcatccttcggcaatccaggttatgatgaccatcgtcgacaacctgcattaggtgcgctg
atgcgtatcttgcatacctgtgtttcacggttcatcgcacaacgagattcaatgagtcag
caagaatggaaaatctccaacattgagactttgtcctcgcaggacttaaatgaggtaatc
aatggaggaaccccccagactatgtctcgagctcaggagaaaaaagttgcagagtttatc
ctaaaacaaagtgtgcaacaaaaaactcatcttcttgaatgtttgtacaatgttcttgaa
aattgtttgctgttattgtggcaacatgttgattattatgtgctccgtgccgtgcccaca
gaaacagcaaatgcaaatattcttttcccatctagaaatcaatcagacacgcatcagcgc
tcactacgcaagttacaagagttttcagaaagttttgttgggcattcttcacaaactgag
tttggttctaatttttcaactccaaaatcagcaggcttgcgtaaagaaactattgttcag
ttaaagatggagcttgcatcttcactacctgatcatttcttaaagaagcttaccaacata
gaaattccaaccaagggaacagctgctagttttatgcaaccaatagttcgccgtctgcag
catattgtaaaacttcattag
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