Ciona intestinalis (yellow sea squirt): 100185402
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Entry
100185402 CDS
T01056
Name
(RefSeq) polycomb group RING finger protein 3
KO
K11488
polycomb group RING finger protein 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100185402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100185402
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
100185402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4_5
zf-UDP
TRAF3_RING
zf-rbx1
DUF3337
zf-RING_10
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100185402
NCBI-ProteinID:
XP_026694278
Ensembl:
ENSCING00000021059
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MAMRTTRQVKGASTDVQMDRKIRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVS
HVEDGRNECPKCEAVIHHSYPLQYLAYDRTMQDIVEKLVPKLKQSEWSRRIQFCHKNNLP
IPFDIHMSNPTVMKDTTLMDDGKQQSYHRYDEQVNIFLRSTSCSLKHLKRPFLQCSIHAT
IKILKKFLAKNLGLGIHQHSELDILCNDEILGKDHTLMFILVTRWRARKPPLQLDYRPSI
VML
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgaactacaaggcaagtaaaaggtgcgtctaccgacgttcagatggacaga
aaaattcgtctccgtaatctgaatgaacacataacgtgttacctttgccacggttacctt
atcgatgctacgacgataacagaatgtctacataccttttgcaaaagttgcatcgtatcg
cacgtggaagacggaagaaatgaatgtccgaagtgtgaagcagtgatccatcatagttac
ccactacagtatctagcatacgatcggaccatgcaagatattgtggagaaacttgtgccc
aagttaaaacagtctgagtggtcacggcgtattcagttctgtcataaaaataatcttcca
attccatttgatattcatatgtccaatcccactgttatgaaagacacaactctgatggat
gacgggaaacaacagagttatcatagatacgacgaacaagtgaatatttttctacgaagt
acttcatgttcccttaaacaccttaagcgtcctttcctacaatgctccatacatgcaacg
atcaaaattttaaagaaatttctcgccaaaaatcttggacttggaatacaccaacactca
gagcttgacattttgtgcaatgatgagatccttgggaaggatcacacgctcatgtttatc
ctcgttacaaggtggagggcaaggaaaccacctttacaactcgactatcgacctagtatc
gttatgttataa
DBGET
integrated database retrieval system
