Ciona intestinalis (yellow sea squirt): 100185465
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Entry
100185465 CDS
T01056
Name
(RefSeq) U3 small nucleolar ribonucleoprotein protein IMP4-like
KO
K14561
U3 small nucleolar ribonucleoprotein protein IMP4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100185465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100185465
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100185465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Brix
Motif
Other DBs
NCBI-GeneID:
100185465
NCBI-ProteinID:
XP_002129644
Ensembl:
ENSCING00000002871
UniProt:
F6TMB1
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Position
1:complement(418792..422439)
Genome browser
AA seq
288 aa
AA seq
DB search
MIRRQARERREYIYRKSIEEKQRSIQERKRKLKNALDENKSIPTELRKDALDLQTNLEYD
DEGGDGVKSSIDDEYKWVGVEDPKIMVTTSRDPSSKLKQFAKEVKLIFPNSQRLNRGNHE
MKALVAACRANDVTDFIILHEHRGNPDGLIISHLPYGPTAYFNISGCVMRHDIPDVGTMS
EVYPHLIFHNFKSKLGERVKTILQALFPVPKDESKRTISFINEDDFISFRHHNYSKPDHK
NIELKEIGPRFQLRLYEIKLGTIDEEASADTEWRLHSFMNTAKKRRHL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgattcggcgccaagcacgcgaaagaagggaatatatttatcgtaaatcgattgaagaa
aagcaaagatctatccaagaaaggaaaaggaaactaaaaaatgctcttgacgaaaacaag
agcatcccgactgagttgcgaaaagatgcgctcgacctccagacgaacctcgaatacgat
gacgaggggggagatggggtgaaatcttccatagatgatgagtataagtgggtgggggtt
gaagatcccaagattatggtgacgacatcaagggacccaagctccaagctcaaacaattc
gctaaggaagtgaaattaatcttcccgaactctcaacgtctcaatcgtggcaatcatgaa
atgaaagcattagttgctgcttgtcgcgctaatgatgtcacagactttattattctgcat
gaacatagaggaaacccagatggcttaataatatctcatctaccgtatgggccaaccgcg
tacttcaatatatcaggctgtgtgatgagacacgacataccagatgttgggacaatgtcc
gaggtttacccgcatcttattttccacaactttaaatcaaaacttggagagagggtgaaa
acgatcctccaagcattattccctgttcccaaggacgaatcaaaacgaacgatatctttt
ataaacgaagacgattttatttcattccgacatcataattattccaaacctgatcataaa
aatattgaattgaaagaaattggacccaggtttcaactcagattgtatgagataaaactt
ggtacgattgatgaagaggcctctgctgacaccgagtggagacttcattcattcatgaac
actgccaagaaacgacgtcatttatag
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