Ciona intestinalis (yellow sea squirt): 100185490
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Entry
100185490 CDS
T01056
Name
(RefSeq) ELAV-like protein 3 isoform X2
KO
K13208
ELAV like protein 2/3/4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100185490
03041 Spliceosome [BR:
cin03041
]
100185490
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100185490
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100185490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_7
BRAP2
RRM_3
Motif
Other DBs
NCBI-GeneID:
100185490
NCBI-ProteinID:
XP_009858055
LinkDB
All DBs
Position
3:complement(4611632..4616717)
Genome browser
AA seq
450 aa
AA seq
DB search
MNMNPMMQMNQMGQNGQMGQTTQMGQMGQVNQMPQQNQMGQVGQMGQQNMVGDGGQIQQI
QNIASTTYGMTTTTTTSTNQAQTNLIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQS
GYSFGYGFVDYVKPEDADKAIQQLNGHPIQHKTIKVAFSKPAGADSKNINLYVAGLNPDT
SEESLKQRFSSYGTIIQTRVLKDKNTNLCSGIGFVLFNTKDEAMAAIKALNGAVFSQAST
SPLVVKFAKTDQKVPDSFQGGNYQGKTGGGPMRGRGLKGIRGRYSPMSGRGGNNNSGFGV
GGGNNFGGGNYNAGYGNSGFGGGGGGFGGPGYGNNMNNYGGGMGYGSFGGNQNYGGGGNH
DRAAEASAQAEGRIVYVYGIGPYTDENALWHLFFNFGTIVRVNVIYDQMKGTGKGYGFIT
FSTAAEASYAVAQMNGYVFQKKALQVSIKT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaatcctatgatgcagatgaaccagatgggccaaaacggtcaaatgggccaa
accacacaaatgggacaaatgggtcaagtcaaccaaatgccacaacagaaccaaatgggg
caggtgggacaaatgggtcagcaaaacatggttggagatggcggtcagatccaacagatc
cagaacatagcctccaccacatacggcatgacaacaacaacaacaacatcaactaatcag
gcacagaccaaccttattgtgaactatcttccacaaactttgtccgatcaggagttctat
caattattcaacaacgtgggtgctgtgacttctgcaaggattatacgagataagcaaagt
ggttacagttttggctatggctttgttgattatgtcaagcctgaagatgctgacaaagca
atccagcagttgaatggccaccctattcaacataaaacaatcaaagttgcattttccaaa
cctgctggtgctgattcaaagaacatcaatctttacgtggctggtttgaatccagacaca
tcagaggaatcattgaaacaaagattttcttcttatggcaccattattcaaaccagggta
ttgaaggacaaaaacacaaacttgtgctctggtatcggatttgttttatttaacaccaaa
gatgaagctatggctgctataaaggcattgaatggtgctgtattctcacaagccagcaca
tctccattggtggtaaagtttgcaaaaaccgaccagaaagttccagattcttttcagggt
ggcaactaccaaggcaagactggaggtggtcctatgaggggtcgtgggttgaagggaatt
cgtggtcgatattcaccaatgtctggtcgaggtggtaacaacaacagcggctttggtgtt
gggggtgggaacaactttgggggaggaaattacaatgctgggtacggcaacagtgggttt
gggggtggtggcggtgggttcggtggacccggctatggaaacaacatgaacaactatggg
ggtggtatgggttatgggtcatttggaggcaaccagaattatggtggagggggtaaccat
gatcgagctgctgaagcttctgcacaggcggaaggaaggattgtttatgtttatgggatt
ggaccttatactgatgagaacgcactctggcatttgtttttcaactttggaacgattgtg
cgtgtgaatgtgatctatgatcaaatgaaaggcaccggcaaaggatacggtttcatcaca
ttcagtactgcagcagaggctagctatgcagttgcccagatgaacgggtatgtcttccag
aaaaaggcattgcaggtctcaattaaaacataa
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