Ciona intestinalis (yellow sea squirt): 100185517
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Entry
100185517 CDS
T01056
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2 isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100185517
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100185517
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100185517
Ion channels [BR:
cin04040
]
Other channels
Mechanosensitive channel (Piezo)
100185517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
100185517
NCBI-ProteinID:
XP_026690860
Ensembl:
ENSCING00000008226
LinkDB
All DBs
Position
7:complement(4842690..4858455)
Genome browser
AA seq
1068 aa
AA seq
DB search
MEDNGALQDETGGNVHGGETSGNQVSASDGNGSHEQPENKRKCCIKRWEEIHKEKTKRDN
EEAKEKMGKRLKLMKDLTVQCKENGITDPIKNHAQATESGDYYMFIDETKRKQIMGSDDE
NMKMHKLLQLVGFDLEKEGVCCDKEKKEEETKSCIESEDMELENLAPTSQGTIISQGVRE
SLKQSCTPKKNNQKNTSADKKKSKITTDKICSCCCAIWYAMAAHFYFVCYFIFILNMMLN
PSVLSGILPFILFFCACFRNIRYNTVLWVIAGGWTLGVFIARLVCYFGSFQFNSQEEINL
HQNEPFSRPRIIGYEKSVPWLVMDSLQLVFVLLQIILLMYPRCPCCCCNGTSEATGSQKA
TTTETTDNPKPTTSEATDSPKPTTSKATDNPKQTTTGATNSPKPTTSKATDNPKQTTTGA
TNSPKPTTSKATNNREAMTTIEKKLCICCCCCKETKCKKKDENIYDVYLLMLVCDTINFL
IFAFAYWSFGFYSTHHTSLLTHLQSNHVPHGLLLLLLVQLLLMFLDRIRYLLHCYCCGLV
YHIVVVVGVHVFLFWFVPYYTNRPFNQNCFAQIWYFFKAVYFLLSGYQIRHGYPSFLTTK
NVFRKYGGINWFLNKCYRLIPFLAEVKTLMDYVFTKTTLTRSEWFNFQSIYAEVYDLECS
KSEKDSARGAPQRGCGKFGWFIVLAVVLLFILGPLFILYFGITVLGVTNNPMQVSMKISL
GSFEPLFQVVADSDHIKVWTKTEFENFRQEFSLSQNAVEFVKDFGYRQIVTVTVGGESKR
IWIISPPQYELLVERLSPNNTKPVRLLFEWTLTNDPAVTDMVSSYGSNSVMLEQSSEERK
HLYQLLKQTKRINTTDSAIIMNLFPQYVHSQSTSSTVRPAYNLYQGTSKTFTNVRLTLRR
NDSSTWWRVFDDPTPKEKPNLQLTIFSDKVSNPYLNFIVSIGWLALYSSYVLVVGNAIRQ
SWGSTSTIMFQELPNVKRILELCNDIYVAQENSMFQLEELLYAKLIFLYRSPTTLIKWTK
PETLKENQNESKNSSQDVVVATSNAAPSNNAAPSNDAASNESGCCCCC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggaagataatggggctttacaagatgaaacaggagggaatgtacacggcggagaaact
tctggcaaccaggtatccgcaagtgatggaaacgggtcccacgaacaacctgaaaacaaa
agaaaatgctgcataaaaagatgggaggaaatacacaaggagaaaacgaaaagggacaac
gaggaagcaaaggagaagatgggcaaaagattaaaattaatgaaggacttaacagttcaa
tgtaaggaaaatggaattacagatccaattaaaaatcatgcacaagctacagaatcaggg
gattattacatgtttattgatgagacaaaaagaaaacaaattatgggatcagatgatgaa
aatatgaagatgcacaaacttctgcagcttgttgggttcgatctggaaaaagaaggtgtt
tgctgcgataaagaaaaaaaagaggaagagacaaaaagttgcatagaaagtgaagatatg
gaattggaaaatttggctcctacgtcacaaggtacaattattagtcaaggggtgagagaa
tcattgaaacagagttgcacaccaaaaaagaacaatcaaaagaacacttctgcagataaa
aagaaatcgaaaattacaactgataaaatttgttcctgctgttgcgcgatttggtatgcg
atggctgcacacttttactttgtttgttattttatcttcattctcaacatgatgctgaat
ccttctgtactatctgggattctccccttcattctcttcttctgtgcatgtttccgcaac
atcagatataacactgtgttgtgggtgattgctggaggatggacattgggggtgttcata
gccagattagtctgttatttcgggtctttccagtttaacagccaggaggaaataaatctc
catcagaacgaacctttctcacggccgaggatcatcgggtatgagaaatccgtaccttgg
ctggtgatggacagtcttcaacttgttttcgtcctccttcaaattattttgcttatgtat
ccgcgttgtccatgttgctgctgtaatggaacatcagaagcaacaggcagccaaaaagcg
acaacaacagaaacaacagacaacccaaaaccgacgacatcagaagcaacagacagccca
aaaccgacgacatcaaaagcaacagacaacccaaaacagacgacaacaggagcaacaaac
agcccaaaaccgacgacatcaaaagcaacagacaacccaaaacagacgacaacaggagca
acaaacagcccaaaaccaacaacatcaaaagcaacaaacaaccgagaagcgatgacaaca
atagaaaaaaagttgtgtatttgttgctgctgttgtaaagaaacaaaatgcaaaaagaaa
gatgaaaacatttatgatgtttatcttctgatgttggtttgtgacaccataaacttcctt
atctttgcatttgcatattggtcattcgggttttattcaacccatcatacaagccttttg
acacatcttcaatcgaatcacgtaccacatggactgcttttactgctattggtgcagttg
ttgttgatgtttcttgatcgaattcgctacctgcttcactgttattgctgtggcctagta
tatcacatcgtggttgtggtgggtgttcatgttttcctattttggtttgttccatattac
accaacaggccattcaaccaaaattgttttgcacaaatttggtatttcttcaaagctgtt
tatttccttctatctggctaccagatcaggcatggctacccaagttttctcacaacaaag
aatgtttttaggaagtatgggggaataaactggtttctgaataaatgttaccgattaatt
ccattccttgccgaagtaaaaacacttatggactacgtattcacgaaaacaacattgacg
agatccgaatggtttaactttcaatcaatttatgcagaagtttatgatcttgaatgttcg
aaaagtgaaaaggatagtgccagaggagcaccccagcgtggttgtggcaagtttggttgg
ttcattgttttggcagttgttcttctcttcatattgggacctttatttatcttatacttt
ggtattaccgttttgggagttaccaacaatccaatgcaagtgtctatgaaaatatctctt
ggttctttcgagccactgtttcaagtcgtagctgattccgatcacattaaagtttggacc
aaaactgaatttgaaaactttcgacaagagtttagcttaagccagaatgcagtagaattt
gtgaaagattttggatacaggcaaattgtcaccgtgaccgtaggtggtgaatcgaagaga
atttggatcatcagccccccacaatatgaactactggtggaaaggttaagtcctaacaat
actaagccagtgaggttgctgtttgaatggacacttactaatgacccagctgtcactgac
atggtatcctcgtacggttcaaactcagtgatgcttgaacaaagtagtgaagaacggaaa
catctttatcaactgttgaaacaaaccaaaagaataaacacaactgacagcgctatcatc
atgaatttgtttccccaatatgttcactcacaaagtacttcctcgactgtgagacctgcc
tacaatttataccaaggtaccagtaaaacatttacaaacgtgaggcttactttacgaagg
aacgatagctccacctggtggcgagtgttcgacgacccaacaccaaaggagaaaccaaat
cttcaacttactatttttagcgacaaagtctctaatccatatttgaacttcattgttagc
attgggtggttggctttatattcgtcttatgttttggtcgtaggaaatgcgattcgtcaa
agttgggggtctacttcaactatcatgtttcaagagcttccaaatgttaaacgaatcctt
gagctttgcaacgacatttacgtggcgcaggaaaatagcatgttccaacttgaagaactt
ctttacgccaagttgattttcctgtatcgatctcccactacgcttatcaagtggaccaaa
ccagagactttaaaagaaaatcaaaatgagtcgaagaattcttcgcaagatgttgttgtt
gctactagtaatgctgctcctagtaataatgctgctcctagtaatgatgctgctagtaat
gagtccggctgctgttgttgctgttag
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