Ciona intestinalis (yellow sea squirt): 100185519
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Entry
100185519 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: 1,4-alpha-glucan-branching enzyme-like
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00500
Starch and sucrose metabolism
cin01100
Metabolic pathways
Module
cin_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100185519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100185519
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
100185519
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100185519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
100185519
NCBI-ProteinID:
XP_026693332
Ensembl:
ENSCING00000014534
LinkDB
All DBs
Position
14:complement(1813566..1817308)
Genome browser
AA seq
673 aa
AA seq
DB search
MECSSYNNQIMQQCGVPAIENLFRSYPQLRIYEDDIRARYGMFEKTKMSIEREEGLERFT
QGHKEFGVMMTEDGGVRCMEWIPNAKAVYLKGEFNNWNLIQYREIGFDKWELFIPPNRDG
SCAIRHCSELKIVIETKDNQRIERISPWAKYVVQREGNQGFKWRFWNPPSSQRVQFTHTR
PNKPDRLRIYEAHIGIASDRCEVSTYRHFTSNILPRIRDQGYNSLLLMAVIEHSYYPSWG
YQVTNYFATSSRYGTPEEFKELVQTAHGMGIYVMVDVMHGEASKNVLDGLNIFDGTEACF
FEEGAKVLNEHDTRIFDYKKWETLRFLMSQLRYYVNEYHVDGFRFNGLSSMIFHDSSKHA
VQQFSFRDNQDSQYFGKQMKTDGLAYIMLMNDMLHRFYPNVITITEDVPGMPALCRPVSE
GGLGFDYRLCKDAANVWEKLLNDTRDEDWNMHFIRQMIRENRVEEKRIMFTEHHEQNEVG
RMTMSRKLIGDSSMSESQQLTPCLDRGLSLYKMTRLFTHAFAGQGFLNFIGNEFGHPDWV
ELPSPSNNDSYQLARRQFHLADNQQLRYKFLNRFDRAMNKTEVRYGWLKSNQAVVTRAQE
SDKVFVFERAGLIFAFNFHPTKSYPDYRIPVDNSEVTKLYWILMIVASVVTAETKPMLNS
TPRLVTATTSLIQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaatgctcaagctataacaaccaaattatgcagcagtgcggagttcccgctattgag
aatctcttccgtagctatcctcagcttcgaatttacgaagacgacattcgggcaagatat
ggtatgtttgagaagactaagatgtcgatcgaaagagaggaaggtttggagcgatttact
cagggacacaaggagttcggggtgatgatgacagaggacggaggagtaagatgcatggaa
tggattccaaacgcgaaagctgtttatttgaaaggagaattcaataactggaatcttatt
caatatcgggagatcgggttcgataaatgggaactctttattcctccaaatcgagacgga
tcatgtgctattcgtcactgcagtgagcttaagatcgttattgaaacgaaagacaaccaa
agaatcgaacgaatttctccatgggccaagtatgttgttcaacgtgagggcaaccaagga
ttcaaatggaggttctggaatcctccttcgtcacaacgagtacagttcactcatacacga
ccaaacaaaccggatcgtcttcgtatctacgaagcacacattggaatcgcatccgatcgt
tgtgaagtttccacttaccgtcactttacatcaaacatcctccctcgcatccgggatcag
ggatacaactcgcttcttctcatggctgtgatcgaacattcttactacccaagttgggga
taccaagttaccaactactttgccacctccagtcggtacggaacgcctgaagaattcaaa
gagcttgtacagactgctcatggaatgggtatttatgtgatggttgacgttatgcacgga
gaggcatctaagaacgttctggatggattgaacatatttgacgggacggaggcttgcttc
tttgaagaaggagctaaggttttaaacgaacatgataccaggattttcgattacaaaaaa
tgggaaactcttcgatttcttatgtctcaattgcggtattacgtcaacgagtatcacgtt
gatggcttcagattcaacggattgtcatcaatgatcttccatgactcgtccaaacatgca
gttcaacaattttctttccgagataatcaagactcacaatacttcggcaagcaaatgaaa
actgacggattggcttacatcatgttgatgaacgatatgcttcacagattctacccgaac
gtgatcaccattactgaggatgtaccaggtatgccagccctttgcagacccgtgagcgaa
ggaggacttggattcgactacagactttgtaaagatgctgcaaatgtctgggagaagtta
ttgaatgatacgcgagacgaagattggaatatgcatttcatcaggcagatgatcagagaa
aaccgagtcgaagaaaaacgaatcatgtttacagaacatcacgaacagaacgaagttggt
cgaatgacaatgagtcgtaaattgatcggagattcgtcaatgtcggaatcacaacagttg
actccatgtttagatcgtgggttgagtctgtacaagatgactcggttatttacccacgcg
tttgctggacaaggatttcttaacttcattgggaatgagtttggacatcctgactgggtt
gagcttccttccccttcaaataatgacagctaccaactcgctcgaagacagttccatcta
gctgacaaccaacaactcagatacaaatttctaaaccgattcgaccgagctatgaacaag
acagaagtgcgatacggatggttgaaatcaaatcaagctgtagtgactcgagcacaggaa
agcgacaaggtgttcgtgttcgaacgtgctggacttattttcgcctttaactttcaccca
acgaagagttatccagattacagaatcccagttgacaattcggaagttacaaaattgtat
tggatactgatgatcgttgcttcggtggtcacagcagaaaccaagccaatgttgaattcc
acgccaagactggtcactgcgacaacttccctaattcaatga
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