Ciona intestinalis (yellow sea squirt): 100185599
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Entry
100185599 CDS
T01056
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cin03012
]
100185599
Translation factors [BR:
cin03012
]
Eukaryotic type
Initiation factors
eIF-5
100185599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
Roc
ATP_bind_1
Ras
Motif
Other DBs
NCBI-GeneID:
100185599
NCBI-ProteinID:
XP_002127409
LinkDB
All DBs
Position
5:1997447..2002517
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AA seq
995 aa
AA seq
DB search
MGKKKGKGSDSKPSQPTDGEPNVTGGKKSRKKQDDNWEDDVLNEIAVMAGGDEPASKAES
VKPDATKKENEPQKTAEQTTPATENAEPVVEKKKNKKKDKKGNKNAQTKPVTSDKTDEQK
TENDSESKNKADDAKPDAEEQAEGTQSNKSKKKKKAKQAEEEKAKKGKPNKAMLKVIQET
LKKKKEEEERLQRIEDERIKKEEDAEKARLHALELIRLKKEKKKQDKKDKILRLKQEGKY
LTPTQREQQKRRQAYLESLKQQGIAIPEKGTEEKMKKPRYEKKKKVKQVEQKSDEPEAED
EEVVEEEPFEIIDVEGDEELVEEEEEEEEEDLGWEAWDDAPVDEEKKDEEVEEDSESDEE
EESESEEEEPVVEHEKNMSSKEKVKLRLEKQRKQYENEKSIKDLRSPIICVMGHVDTGKT
KILDKIRHTNVQDGEAGGITQQIGATNIPVNAILEQTKMVKDRKEIQLPGLLVIDTPGHE
SFSNLRSRGSSNCDMAILVVDIMHGLEPQTIESINMLKKKKTPFVVALNKIDRLYEWKSQ
PKMDITNCIQSQKKNVMNELTEKVNGVIVQFAEQGLNVKLYYENEDPKHWISMIPTSAIS
GDGMGNLMALVVQLCQTVLVKRLMYSEQLQCTVLEVKAIQGLGTTIDVILTNGRLKYGDT
IVVPGVEGPIVTHVKGLLMPEPLKELRVKNPYTKYSEVKAAQGIKILAKDLDKAMAGASL
LVARGEEEIEICKEEVQAEVNEALKAIKLQERGVFVQASTLGSLEALLEFLKQSKIPYAG
IGIGPVHRKDIMKASVMLEHDDQWAVILAFDVKVEREAQEIAENLGVKIFTADIIYHLFD
AFMQHREDLKKRKQDEFRQVAVFPCKIRIAPNCVFKSRDPIIIGVQVESGQLRVGTPICA
QLPSGEILPVGIVASMEFNHKPIEIARKPQEVCIKIEGTPGEAPKMVGRHFGEKDLLMSK
INRDSINALKDWFRDDMTKNDWQLIIELKKLYEII
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaagaaaggaaaggggagtgattcaaaaccatcacaacctacagatggagaa
cccaatgttactggtggaaagaaaagcagaaaaaagcaagatgataattgggaagatgat
gtactgaatgaaatagctgttatggctggaggtgatgaaccagcttctaaagcagagtct
gtgaagccagatgctaccaagaaggaaaatgaaccacagaaaactgcagaacaaaccacg
cctgctacggaaaatgcggaacctgttgtggagaaaaaaaagaataagaaaaaagataaa
aaaggaaataagaatgcccaaactaaacctgtcacttctgataaaactgacgagcagaaa
actgagaatgattcagaatcaaaaaacaaagcggatgatgcaaaacctgatgctgaagaa
caggctgagggaacgcaatcaaataagagcaaaaaaaagaaaaaggcaaagcaagctgaa
gaagagaaagcgaagaaggggaaaccaaataaagcaatgctgaaagttattcaagaaact
ttaaaaaagaaaaaggaagaagaggagcgtctccaacggatagaggacgagagaattaaa
aaagaagaagatgcggaaaaagcaagattgcatgctctcgagcttattagactgaaaaaa
gaaaaaaagaagcaagacaaaaaggataaaatattaaggttgaaacaagaaggaaaatat
ctgactccaactcaacgggaacaacagaaaaggaggcaagcatatctggaaagtttaaaa
caacaaggtattgctatcccggagaagggaacagaagaaaaaatgaagaaacctagatat
gaaaagaagaagaaagttaaacaagttgaacagaagtcggacgagccagaagctgaagac
gaagaggtggttgaggaggaaccattcgagataattgatgtggaaggggatgaggaacta
gtagaagaagaagaagaagaagaggaagaagatcttgggtgggaagcatgggatgatgct
cctgttgatgaagagaagaaagatgaggaggttgaagaagactctgagagtgatgaagaa
gaggagtctgaatcggaagaggaggaacctgttgttgagcatgagaagaacatgtcctct
aaggaaaaagtcaagttgagattggagaagcaaagaaagcaatacgagaatgaaaaatcc
attaaagatcttcgctcgccaattatttgcgtcatggggcatgtcgatactggcaaaacg
aagattttagataaaattcgacacactaatgtacaggatggtgaggctggtggtattact
cagcaaattggggccactaatattccagttaatgcaatcctggagcaaacgaaaatggtg
aaggatcgtaaagagattcagttacctgggctgttggttatcgataccccaggtcacgaa
tcttttagcaatctgcgttctcgtgggtcttcaaactgtgatatggcgattcttgttgtt
gatattatgcatggtcttgaaccacaaactatagaatcaattaacatgcttaagaaaaag
aaaacaccatttgttgttgctttaaataaaatagatcgactctacgaatggaaatcgcag
ccgaaaatggatattacaaactgtattcaatctcagaagaaaaatgttatgaatgaattg
acagaaaaagtcaatggggtgatcgtacagtttgctgaacaaggtttaaacgtgaagttg
tattatgaaaatgaggacccaaagcactggatttctatgataccaacatctgctatatct
ggcgatggtatgggtaacttaatggcactggtcgtgcagctatgccagactgtgttagtc
aaacgactgatgtactctgaacagttacagtgcactgtgttggaagtaaaggcaattcaa
ggtcttggtacaactattgatgttattcttactaacggaaggctgaagtacggtgacaca
attgtggttccaggcgtggaaggtccaattgtcactcatgtcaaaggattgctcatgccg
gaacctttaaaggaattgcgtgtgaagaatccttatacaaaatacagtgaagtgaaagcc
gctcagggaatcaaaattcttgcaaaagatttagataaagctatggctggtgcgtcattg
cttgtggcccgtggtgaagaagaaattgaaatatgtaaagaagaagttcaagctgaagtt
aatgaagctttgaaggctattaaactgcaagaacgtggtgtgtttgtccaagcctccact
ttaggatctttagaagcattgttagagtttttaaaacaatctaagataccatatgctggg
attggaattggtcctgtgcatagaaaagatatcatgaaagcatctgtaatgttggagcat
gatgatcaatgggctgtgattctcgcttttgatgtgaaagtggagagagaagcacaagag
atagctgaaaatctcggagtgaaaatttttacagcagacatcatataccatctgtttgat
gcgtttatgcagcatagagaagatctgaagaaacgtaagcaagacgagttcagacaagtt
gctgtgttcccatgcaaaatacgcattgctccgaactgtgtttttaaatccagagaccct
atcattataggagtacaggtagaatctgggcagctgcgtgtcgggactccgatctgtgct
caacttccctctggtgaaatcctgccagtgggtatagttgcgagcatggagtttaatcat
aaaccgattgaaatcgctcgtaaaccacaagaagtttgcatcaaaattgaaggaacacct
ggagaagcaccgaaaatggtgggccgccattttggagagaaagacttattgatgagcaag
ataaatcgcgattctattaatgccttaaaagattggtttcgtgatgatatgacaaaaaat
gactggcaattaattattgagctaaagaagttgtacgaaatcatttaa
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