Ciona intestinalis (yellow sea squirt): 100185626
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Entry
100185626 CDS
T01056
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100185626
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
100185626
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
100185626
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Others
100185626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
100185626
NCBI-ProteinID:
XP_002126759
Ensembl:
ENSCING00000006261
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All DBs
Position
10
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AA seq
948 aa
AA seq
DB search
MESCNRRWRLPSMCLLACIMVVFLDQPLSANAQLPKLDDGLDRCHPNKTAKPRVCQPGVI
LPLWPPAEITHITTADTVGRAIVYLVALIYLFLGVSIIADRFMASIEVITSKEKVVVYRK
PNGEEAKTTVRIWNETVSNLTLMALGSSAPEIMLSVIEIIGKRFEAGDLGPSTIVGSASF
NLFIIIAICMYVIPDGEIRKVKHPRVFFITATWSILAYVWLYVILAVSSYGVVEIWEGVL
TFLFFPMLVVLAWIADRRLLVYKYMYKRYRMRKNKNMIVETEGSALDEDNRQDGTTVLNM
DSLEDGKANTDDDQVGNVMDPLIVDPESNRKAMIRIMRELRKTHPDADMAELAKMASSEA
LSNQPKSRAFYRIQATRKMTGAGNILNKGKNDQAKTADNLSMVLEDPDDAVAKIYFEPAE
YKVMENCGVAELQVVRTGGDLNTTLYVDYQTEDGTANAGSDFEHAEDTIVFKPGETTKTI
AITIMDDDIFEEDEYFRVKLCNVRSGDADGMFDTKANSTQVARLEPPAVATVVILDDDHA
GVFSFPEPTITVSEGVGVLKVEVQRNSGARGRITVPYKTVSGTAKGGGEDYIDAIGELDF
DNDETTKCINVTIIDDEEYEKNKSFFVELSQPKLYSDKDSGTDAGSDSGINGKEIDKKAT
EEEEEARRIAELGKPRLGAETTVEIIIEESYEFKNTVDKLIKKANLAVIVGTSSWREQFI
EALSVNGGDDDDSDEEESEPSCFDYVMHFLTVFWKLLFAFVPPTEYFSGWACFTVSIIMI
GVLTAVIGDVASAFGCVVNLNDAVTAVTLVAMGTSVPDTFASKVAAVGDQYADASIGNVT
GSNAVNVFLGIGIAWTIAAIYWAVTGRTPEEQKFRVNPGNLAFSVTVFSSFAIIAIAILM
IRRRSKSIGAELGGPRVPKIICSLFFLTLWLVYIILAALDSYCVIRTF
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagagttgcaacagaagatggcgtcttccaagtatgtgccttctcgcatgcataatg
gttgtttttcttgatcaacctttaagtgcaaatgcgcaactgccaaagttggacgatggc
ttagacaggtgtcacccaaacaaaacagcgaagcctcgcgtatgccaacctggagttatc
ttaccactctggccacctgctgaaatcacacatataacaactgcagacaccgtggggcgt
gcgattgtttaccttgttgctttaatctatttgtttcttggcgtttccataatcgctgat
cgtttcatggcctcgattgaggttataacctccaaggaaaaagttgtggtgtatcgaaaa
ccgaacggggaagaagcgaagacgacggttcgaatttggaacgagactgtatcgaattta
actctcatggcactcggttcttccgcgcctgaaatcatgctgtctgtcattgaaatcatc
gggaagagatttgaagccggagacctcgggccttcaacaatcgttggtagtgcatcgttc
aatctctttatcattatagccatctgcatgtatgttatacccgatggggaaattcgaaag
gtgaagcatcctcgagtgtttttcattaccgctacttggagcatccttgcttatgtatgg
ctgtatgtaattctagccgtgtcatcttacggcgtggttgagatatgggaaggtgtgctt
accttcctgttcttcccaatgctggtagtattggcttggatcgctgaccgccgccttctg
gtttacaagtacatgtacaagcgctaccgaatgcgtaaaaacaagaacatgatcgtagaa
actgaaggtagcgctttggacgaagacaacaggcaagatgggaccacggttttgaacatg
gactcgttggaggatggcaaagcaaacacggatgacgatcaagttggaaatgtaatggat
cctctaatcgttgacccagagagcaacagaaaagcaatgatccgaattatgcgggagctt
cgcaagacgcatcccgatgctgacatggcagaactagctaagatggcgagctctgaggcc
ttgagtaaccaaccgaagagcagagcgttttacagaattcaagcgactcgtaaaatgacc
ggcgcagggaatattcttaacaaaggaaaaaacgaccaagctaaaacagcggataactta
tccatggttcttgaagaccctgacgatgcagttgccaaaatttactttgagccagcggag
tataaagtaatggaaaactgtggtgtggccgagctacaggtcgtgcggactggtggggac
ttaaacacgactttgtacgtggattaccaaaccgaagacgggaccgctaacgcaggctct
gacttcgagcatgcggaagacaccatagtattcaaaccgggcgagacaacgaagacgata
gccatcacgattatggatgacgacatttttgaagaagacgagtatttccgagtgaaactc
tgcaacgtaagatccggtgacgcagacggtatgttcgataccaaagcaaattccacccaa
gtcgcaaggctggagccgccagcagttgcaacggttgttatattggatgacgaccacgca
ggtgttttctcattccctgaacccaccattacggtgagcgaaggcgttggagttttgaaa
gtggaagtacagcgtaactcaggagcacgcggtcgaataactgtaccttacaaaacggtg
agcggaacagcaaaaggaggcggagaagactatattgacgcaatcggagagcttgatttc
gacaacgacgagaccacaaagtgcatcaacgtaacgataatagacgacgaggaatatgaa
aagaataaaagttttttcgtcgagttgtcccaacccaagctgtattcggacaaagactca
ggaacggatgcagggagcgattccgggatcaacgggaaggaaattgacaaaaaggcaacg
gaagaagaggaagaagcaaggaggattgccgaactcggtaaaccccgtcttggagcggag
acaacggtcgaaattataattgaagagagctacgagttcaagaatacagtggacaaactc
atcaaaaaggcgaacttggctgtaattgttggtacctcgtcgtggagggaacagtttatt
gaagcactttctgtgaacggaggagacgatgacgattcggatgaggaagaatctgagcca
tcctgttttgattacgtcatgcattttctaaccgtattttggaaattgctcttcgccttc
gttccacccaccgagtactttagcgggtgggcttgtttcaccgtgtcaatcatcatgatt
ggggtgctgacagcggtgatcggcgacgtagcgtctgcctttggctgtgtggtaaacctc
aatgacgcagtcacggcagttactcttgttgctatgggcaccagcgtcccggacaccttt
gcaagcaaagttgcagcagttggggaccagtatgctgatgcatctatcggtaatgtcact
ggttcaaacgcagtgaatgtcttccttggtatcggtattgcttggaccattgccgccatt
tactgggcggttactgggagaactcccgaagagcaaaagttcagagtcaatcccgggaac
ctcgcgttttcagtcaccgtcttttcgagtttcgcgatcatcgcgattgcgatcttaatg
atacgcagaaggtcaaaatcgatcggggctgagctcggaggacctcgcgtcccgaaaatc
atctgcagtctttttttcctgacgctctggctggtctatattatcttggccgctctcgac
agttactgcgtcatcaggaccttctaa
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