Ciona intestinalis (yellow sea squirt): 100185637
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Entry
100185637 CDS
T01056
Name
(RefSeq) polycomb group RING finger protein 1
KO
K11487
polycomb group RING finger protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100185637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100185637
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100185637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
RAWUL
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-RING_10
zf-ANAPC11
zf-Nse
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
100185637
NCBI-ProteinID:
XP_002130076
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MTSVGNDKPVLQDSDLILKIRTLNPHIVCALCAGYFIDATTISECSHTFCKSCIVKHLQT
KKSCPECSQKIHETQPLMNLRSDRVMQDVVYKLVPNLFQAEQQREAEFYRSRGVDFSLSG
SHLLNIGTPLKYTQQKVLRDTSDLDVPKIDARKIPNVHIAHRYKFDEKLYFQLMLDETML
PYHDGGLIRFENLTFKELPKYIRCPGRATVWHIEKIIASQLRLGSEHVLQLSCCGRDLDS
STGLKQITLMSYYSKSNAGFENQCIPIMKYKVEMR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgttggtaatgataaaccggtcttgcaagatagtgacttaatccttaaaata
aggactttaaacccccacattgtatgcgcgctgtgcgctggttattttatcgatgctaca
accatttcggaatgctcccacactttctgcaagagctgcattgtcaagcatctgcagacg
aagaagtcatgcccagagtgcagccagaagatccatgaaacgcaacctctcatgaacctt
cggagcgatcgtgtgatgcaggatgttgtttacaaactcgtcccgaacctcttccaagca
gagcagcaaagagaagcggagttctacagaagcagaggagtggacttctccctgagtggg
agtcatcttcttaacatcgggactccgctaaaatatacgcaacaaaaagttctccgagac
acttccgatctcgacgtgccgaaaattgatgcgcggaagatcccaaatgtgcatattgcg
cacagatataaatttgatgaaaaactatacttccaactgatgttggacgaaacaatgtta
ccgtaccatgatggtggtttaattaggtttgaaaatcttacctttaaagagctaccgaag
tacatacgttgcccaggtcgtgctactgtgtggcatattgagaaaattatcgcttcacaa
ttaaggctcggcagcgagcatgtgctacagctgtcatgttgtggcagggacttggacagc
tctaccggcttaaagcaaattactttaatgtcgtattatagtaaatcgaacgctggattt
gaaaatcaatgtattccaattatgaagtacaaagttgaaatgagatga
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