Ciona intestinalis (yellow sea squirt): 100185662
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Entry
100185662 CDS
T01056
Name
(RefSeq) lysine--tRNA ligase isoform X2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100185662
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100185662
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100185662
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
100185662
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100185662
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100185662
Prokaryotic type
Other AARSs
100185662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
100185662
NCBI-ProteinID:
XP_002131983
Ensembl:
ENSCING00000009513
UniProt:
F6XJ08
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Position
3:complement(2023088..2028836)
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AA seq
576 aa
AA seq
DB search
MADNGDCEEKKISKNEMKRQLKAQQKAKEKAEKAAKALENAPKEVKPEKTASKEEETLDP
NQYLQIRKNTITTLRQNNIEPYPHKFHVSISLSDYVEKYNNIEVGSHLNDQQVSIAGRIH
AKREAGPKLIFYDVRGDGVKLQVMANSKMYSSEEAYQEINERTRRGDIIGVIGHPAKTKK
GELSIVPNTIEILSPCLHMLPHLHFGLKDKETRYRQRYLDLIMNDQTRQKFITRAKIISY
IRSFFDQMGFLEVETPMMNMVAGGATAKPFITHHNDLDMDLYMRVAPELYLKMLVVGGLD
RVYEIGRLFRNEGIDMTHNPEFTSCEFYMAYADYEDLMKISETLISGMVKQICGSYKLTY
HPDGPDSEGYEVDYTPPFRRLRMLPDLERLTGMEFPKPTELHTAGAQARLDEICVKLGVE
CPPPRTTARLLDKLVGDYLEVNCINPTFITEHPEIMSPLAKWHRSIKGLTERFELFVNKK
EICNAYTELNDPMIQRQRFEQQALDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDR
LTMFLTDSNNIKEVLLFPAMKPDDQVPKKAEDSPST
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacggagattgtgaagaaaaaaaaatcagcaaaaatgaaatgaaacgtcag
cttaaagctcaacaaaaagcaaaggaaaaagcagagaaagcagcaaaagcattggaaaat
gccccaaaggaggttaaacctgaaaaaacggcttccaaagaagaagaaacgttggatcca
aatcaataccttcaaatccgtaagaacacaatcacaactttgcgtcaaaacaacattgaa
ccatacccccacaaatttcatgtttctatatcactaagtgactatgtggagaaatacaac
aacattgaagtaggttcccacttaaacgaccaacaagtcagcattgcaggtaggattcat
gcgaaaagggaagcaggtccaaaattaatcttctatgatgttcgtggtgatggtgtcaaa
ctacaagtgatggccaactcaaaaatgtattcatcggaggaagcttaccaagaaatcaac
gagaggacacgaagaggtgacatcatcggtgttatcggacatcctgccaaaacaaagaaa
ggggaactcagcattgttccgaacacaatagaaatcttatctccatgtcttcacatgctt
cctcatcttcattttggtttgaaagacaaggagactcggtacagacagaggtacttggat
ctcatcatgaatgatcagacacggcagaagtttataacacgagcaaaaatcatttcttat
atacgttctttctttgatcaaatgggatttttagaggttgaaacacccatgatgaacatg
gtagcaggaggagctactgccaaaccattcatcactcaccataatgatttagatatggac
ctttacatgagggtagcaccagaactttacctgaagatgttggttgttggtgggttggat
cgtgtgtatgagatcggtcgcttgtttcgtaacgaaggtatcgacatgacgcataacccg
gagttcacatcgtgcgagttttacatggcctatgctgattatgaggatttaatgaagata
tctgaaactcttatttctggaatggtgaaacagatctgtggatcgtataaactcacttat
catcctgatggtccggatagcgagggatacgaggtggattatactcctccctttcgcaga
cttcggatgttgccggatctagagagattaaccgggatggagtttccaaaaccaaccgaa
cttcacacagcaggagctcaggcacgactcgatgagatttgtgtcaaacttggagtggaa
tgtccccctccacgtactactgcacgcttgctggataagttggttggtgattatcttgag
gtaaattgcatcaacccaactttcatcaccgaacatccagagatcatgagtcctcttgct
aagtggcatcgatccatcaaaggtttaactgagaggttcgagttatttgtaaacaagaag
gaaatatgtaatgcttatactgaattgaacgatccaatgatacaacgacaaagatttgaa
caacaagctctggacaaagcagctggtgatgatgaagctcaaatggtagatgagaatttc
tgcacagcccttgaatatggtttgccaccaactggtggttggggtatgggcattgataga
ttgacgatgtttctaactgactctaataatatcaaggaggttcttctctttcctgccatg
aaacctgatgatcaagttcctaaaaaagcagaggattctccttccacttga
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