Ciona intestinalis (yellow sea squirt): 100185682
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Entry
100185682 CDS
T01056
Name
(RefSeq) complement component C6
KO
K03995
complement component 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
MACPF
TSP1_spondin
Ldl_recept_a
TSP_1
Motif
Other DBs
NCBI-GeneID:
100185682
NCBI-ProteinID:
XP_002130807
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Position
3:4846613..4851638
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AA seq
569 aa
AA seq
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MNRLIASFLVLFVLACFLAEGESWWASRRRRRRYVPPPPPRINCAVSSWGSWSSCSRSCY
PGGTRYRTRYVTRYPKNGGSGCPGLTWTTGCNSQACPKYNCYWGKWGGWSSCSKCSASAR
SRLRNVTQAAMFGGATCPGHEYMTASCPHTASCTTSCPAGFFKCRDGLTCVKSTLRCNGD
DDCSDNSDEMNCPKIFSPCGSSKHGVIPNIYLAGAGYDITTGKMAGKILDNHQYNGRCVK
VVSGDHNQIYRQPANIQYYRFQVSVDSTFTTKAYSSAKDYVEDQRKAMSTKVSASVSYGT
AFFSASVSSSYTGSKSTKQVVQQASNNDAQFFTVTSEIKLAQFRTVRGNYILSHNFRRRL
RDLPSHYDFMKYLQVIADYGTHFYSSGVLGGKYDYTYRYSKNELRSSGLSESDQKHCLSL
EASARYMGVSASASTSGCSSNSLSKKHGSSFTKSASEVISKVVGGSSSAAASLTFGKNPD
SSKYDAWVKTVKANPTMIDFQLTPISAVIPDSAKRRNMQQALYHYMSKYDYNTCKGTCYN
GAGKIITNAGKTCTCLCKSPYTGQDCHNR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggttaattgcttcgtttttagttctttttgtgctggcatgtttcttggcagaa
ggcgagagttggtgggcatcgaggagaagacggagacgatacgttcctccgcctccacct
cgcattaactgtgctgtttcgagttggggctcttggtcatcatgttcgagatcttgttat
cccggcggtacaaggtacagaactcgatatgttacacgttatcctaagaatggcggaagc
ggctgccccggtctaacgtggacaacaggatgcaattcacaagcatgtcctaaatataat
tgctactggggtaaatggggcgggtggtcttcatgcagcaagtgctcagcttcagccagg
agtcgtctccgaaacgtcacacaagctgctatgttcggaggagctacgtgtcccggccat
gaatatatgaccgcgtcttgtccccatacagcttcatgcacaacatcatgccctgccggt
ttcttcaagtgtagagatggtctcacttgtgtgaaatccacgttaagatgcaatggcgac
gatgactgtagcgacaactctgatgagatgaattgcccgaaaatattctctccgtgtggt
tcatctaaacatggcgtcatcccgaatatctatctcgctggagcaggatacgatatcacc
actggaaagatggcaggtaaaatattggataaccaccaatataacggaaggtgtgtgaaa
gttgtaagcggagaccacaatcaaatttacaggcaacctgccaatatacagtactacaga
tttcaggtttctgtagattcgacctttacgaccaaggcatacagcagtgctaaagattac
gttgaagaccaacgaaaggcaatgtcaacaaaagtttcagccagcgtcagttatggaacc
gcgttcttctctgcttcagtcagctccagttacactggtagtaaaagcacaaaacaagtt
gtacaacaggcaagcaacaacgatgcacaattcttcacagtcacgagcgaaatcaaacta
gctcagttcagaaccgtcagaggaaactacattctttcgcataacttccgacgccgtctt
cgtgatctaccatctcactacgatttcatgaaatatcttcaagtgatagctgactatgga
acgcatttctattcatcgggtgttttaggtggcaagtacgactacacatacagatactcc
aaaaatgagctgagatcttcaggtttgagtgaatcagatcaaaaacactgcctctctctg
gaagcgtcagccaggtatatgggcgtcagtgcatccgcatccacgagtggttgttcgtca
aactcgctgtcgaaaaaacatggaagcagcttcaccaagtcagcaagcgaggtaatttct
aaagtcgtcggtggttcgtcttctgcagcagcttccttgacctttggaaaaaatccggac
agttcgaagtatgacgcgtgggtgaaaactgtcaaggcgaacccaacaatgattgacttt
cagctcacacctatcagcgcagtgatacctgattccgcaaagagacgaaacatgcaacaa
gccttgtatcactacatgagcaaatacgattataacacatgcaagggaacatgctacaac
ggggctggcaaaatcatcaccaacgccgggaaaacttgcacttgcctttgcaaatctcca
tacacaggccaagattgtcacaaccgttaa
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