Ciona intestinalis (yellow sea squirt): 100185712
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Entry
100185712 CDS
T01056
Name
(RefSeq) coiled-coil domain-containing protein 47-like
KO
K24962
PAT complex subunit CCDC47
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cin03110
]
100185712
04131 Membrane trafficking [BR:
cin04131
]
100185712
Chaperones and folding catalysts [BR:
cin03110
]
Other chaperones and cochaperones
Others
100185712
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
100185712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
DUF3149
Motif
Other DBs
NCBI-GeneID:
100185712
NCBI-ProteinID:
XP_002128684
Ensembl:
ENSCING00000002197
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MKVLVLSLFIASIVIVHAGNKHAGNIEDNEFAEFEDFDDTEKQTTINNGFVEFEAEQVEE
KPTNEVEDVVVETEEDEEFESLDPDEFEGLPGDDTIWENDKKVDKNIKKKKPELKIADVP
LHLRSWDKYYVEILMALGIFVYLINFFIGKAKNNTLASSWLSHHLDFLHKSFALVGDDPQ
NKKIESTNELQKESEHVYTLWCSGRQCCEGMLVELKLLKRQDLISVIAHQMKPINDQVTI
SVKMTTLPSLVFCVGIKKSITNLHKTMQDLCLYCADKAKMGEKYNLPLSMLMLSELYGDV
PAFILDSTVVRVLKDHQNLFDSLHISDQYSGAKPLDQNDDAPAIPETVKQITLVINLPEK
PSEIGEMVPLLKMLIYLSDKLKKLRLSRDSQIKADKHRADVADRYLKQTHAQRQEAAQQK
KEEKARALKERMMNEEDPEKQRRLDEMIQRKEQNKKNKKMMKGRQYKVKAM
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattagtactttctttgtttattgcttctattgtcatcgtccatgctgggaat
aagcatgcaggaaatatcgaagacaatgaatttgcagaatttgaagattttgatgatact
gaaaaacaaacgacaatcaataatggatttgttgagtttgaagcagagcaggttgaagag
aaaccaacaaatgaggttgaagatgttgtggtggaaacagaggaggatgaggagtttgaa
tctttagatccagatgaatttgagggactaccaggcgatgatacaatttgggaaaatgac
aaaaaagttgacaaaaatattaaaaagaaaaaacccgagttgaaaatagcagatgttcca
ttgcatttaagaagctgggataaatattatgtggaaattttaatggctcttggaattttt
gtttatttgatcaatttctttattggcaaggcaaagaacaacactcttgcatcatcttgg
ttgtctcaccatcttgattttcttcacaaatcctttgctctcgttggagatgatccacaa
aacaaaaaaattgaaagcactaatgaacttcagaaggaatctgaacatgtttacacatta
tggtgttctggtcggcaatgctgtgaagggatgctagttgaattgaaattgttgaaaaga
caagatttgatatccgtgattgctcatcagatgaaaccaattaacgatcaggttacaata
tcagtaaagatgacaactcttccatctcttgtattttgtgttggaataaagaaaagcatc
accaacctccacaaaactatgcaagatttgtgcttgtattgtgctgataaagcaaaaatg
ggtgagaaatacaaccttcctttaagcatgttgatgttatctgagctttatggggatgta
cctgccttcatattggatagtacggttgttcgtgtgttaaaggatcatcagaatttattt
gattcccttcatatttcggatcaatactctggtgccaaacctctagaccaaaatgatgat
gcacctgccattcctgagactgtaaagcaaattactcttgtaattaatttgccagaaaag
ccttcagaaataggagaaatggttccgttgctgaaaatgttaatttatctaagtgacaag
cttaaaaaattaagactttcaagagacagtcaaataaaagcagataaacaccgagcagat
gtggctgatcggtatctcaagcaaacacacgcacaacgacaagaggcagcacaacagaag
aaagaggagaaagcgcgtgctttaaaggaacgaatgatgaacgaagaagatccagagaaa
cagcgaagattggatgagatgattcaacgcaaagaacagaacaagaagaacaagaaaatg
atgaaaggcagacaatataaagtcaaagcaatgtga
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