KEGG   Ciona intestinalis (yellow sea squirt): 100185722
Entry
100185722         CDS       T01056                                 
Name
(RefSeq) mutS protein homolog 4-like
  KO
K08740  DNA mismatch repair protein MSH4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cin03036]
    100185722
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    100185722
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II AAA_21 AAA_22 AAA_14 AAA_23 AAA_29 AAA_27 HTH_Mga
Other DBs
NCBI-GeneID: 100185722
NCBI-ProteinID: XP_026693129
Ensembl: ENSCING00000020112
LinkDB
Position
13:complement(589091..597966)
AA seq 812 aa
MAHRKPKYRYGLLETPETSDFGDETTLQSSTVCDSTFHKTIEQAGPSNRANISPFTPTTP
KCNYVFVAKSNFQANSSDNCTPKNRVKLSHNFTDRTLLASDEASTSSKSSTPVFQVPSGY
PPKRVGSFPNVAQRTPIFRPNSRAPSSSNLTKSTPRRSIVTPSGYKSTPRTTPRSRNTPK
VSETPRNNDPSIVVTIVEGRGLARGEIGMASIDLKNPILTLSQFSDSQTYVKTLTKLQIL
SPIEIVFPSTMCDNGSMTQVFKFVNENFQSSNITTVQRHYFNETNGLDMIKRLVMRENSS
VVMDVTAKYYCLAASAALIKYVEFVQNTIYASESLRIVFKGSEQTTLIDAGTSSVLELAV
NLNDPKSDQSLYGVLNHTKTQGGSRLLRCNVLQPPNDVETIQGRLDCVEDLSNSSELFFG
ITALCINNTFLFSHSLVTELLSEVRTCIGCLYNLSEIVSTLDMLMSFAHVRTVTDCVRPE
FTDTLAVKSGRHPVLDRVLPSLVPNNIYAADGTNFSVITGPNMSGKSTYLKMIALLQVMA
QIGCFVPADFASFRISDQIFSRIGSDDDMETNSSTFVLEMKEINYILQNCEGNSLILIDE
LGRGTSTEEGIGLCWAISEFLLVQKSFTFFATHFLELCRLETIYPNVENYHMQIQHIVSA
KGSLRKVSYTYVLSKGHTEEKHYGLQLAELFNFPSSVMSQAREIAASMQETSDTADIVTT
AERKKDNADYRFATKLLQVSRSSKLSSEALKEYLKRLREEYEKEISINITSPNPDNETGK
TPPEDQPLAPVSSLFEKSNSAYQMVPESGISV
NT seq 2439 nt   +upstreamnt  +downstreamnt
atggcacataggaaacctaaatacagatacggacttcttgaaactccagaaacatccgat
tttggcgacgaaacaacattgcaatcttccacagtatgtgacagtacgttccataaaaca
atagaacaagctggaccttctaaccgagctaatatatcaccatttacacctactacacct
aaatgcaactatgtttttgtcgcaaaatcaaattttcaagctaattcaagtgataattgc
acaccgaagaacagagtgaagttatcacataactttacggacaggactctccttgcttct
gatgaagcttctacttccagcaagtcaagtaccccagtgttccaggtacccagtggttac
cctccaaaaagagttggatcttttcctaatgtagcacaaagaacaccaatcttcaggccg
aatagcagggcacccagttcttctaatttgaccaagagcacgcccaggaggtctatagtt
acacctagtggatataaaagtacaccacgaaccacgccacgtagtcgtaacactccgaaa
gtatcagaaacgccaagaaataatgatccttcaattgtggtgaccattgtagaaggcagg
ggtctagccagaggcgaaataggaatggcttcaattgacttaaaaaatccaattctgacg
ttatcccaattttcggactctcaaacttatgtgaaaacgctcacaaagcttcagattttg
tctccgattgaaatagtttttccaagcacgatgtgtgataatgggagcatgacacaagtg
ttcaaatttgtgaatgagaattttcagagttctaacataacaaccgtacaaagacattac
tttaatgaaacaaatggtcttgatatgattaaaagattggtcatgagggaaaatagctct
gtggtaatggatgtaacagctaaatactactgtcttgcagccagtgcagcattgataaaa
tatgttgaatttgttcaaaacacaatatacgcatcagaatcattgaggatcgtattcaaa
ggcagcgaacaaactactttaatagatgctggtacttcttctgtgttggaactcgctgtg
aatctaaatgacccaaaaagcgaccaatctttatatggtgttctgaaccacacaaagaca
cagggaggatcccgtcttctccgatgtaacgtcctccaacctcctaatgatgttgagacc
atccaagggaggctagattgcgtggaggatctttcaaactcttcagagctcttctttggg
ataactgctttgtgtattaacaatacctttcttttttcccacagtcttgtaacagaactc
ttatcagaagtgcggacttgtataggatgtttatacaacctatctgagattgtatctaca
ctagatatgcttatgtcatttgctcatgttagaacagttactgattgtgttcgtcccgaa
tttacggacactctggcagttaaaagtggtcggcaccctgtgttggatcgtgtgctgcca
tctttggtcccaaacaacatatacgcagctgatgggaccaactttagcgtgattacggga
ccaaatatgagtggcaagtcaacttatttgaaaatgatagcgttattacaggtgatggca
cagatcggatgtttcgtcccagctgactttgcatctttccgcatctcggatcaaatcttc
tcgaggatcggaagtgatgacgacatggagacgaactcttctacgtttgtgctcgagatg
aaagagataaactacatcttacaaaactgcgaaggcaacagtttaattctaatcgatgaa
ttaggccgcggtacatcaactgaagaaggaattggactatgttgggctatttcagaattc
ctgctagttcaaaagtctttcacattttttgcaactcattttcttgagttgtgtcgtttg
gagacaatttaccccaacgtggaaaattatcatatgcagatacaacacatagtatctgcg
aaaggcagtttacgaaaagtaagttacacttatgttttgtcaaaaggacacacagaagaa
aaacattacggtctacagttagctgaattgttcaattttccatcctctgtgatgtcacaa
gcgcgggaaatagcagccagtatgcaagagacttcagatacggctgatattgttacaact
gctgagaggaaaaaggacaacgctgactacagatttgccacaaaattacttcaagtctct
agaagttctaagttaagcagtgaagctttaaaagaatatctgaaaaggttacgagaagag
tatgaaaaagaaattagtataaatataacatcgcctaatcctgataatgaaactggtaaa
acaccgccagaagatcaaccgcttgcccccgtctcttccctgtttgagaagagcaactct
gcttaccagatggtgccagagagcggtatttcagtttga

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