Ciona intestinalis (yellow sea squirt): 100185722
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Entry
100185722 CDS
T01056
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100185722
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100185722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
AAA_21
AAA_22
AAA_14
AAA_23
AAA_29
AAA_27
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
100185722
NCBI-ProteinID:
XP_026693129
Ensembl:
ENSCING00000020112
LinkDB
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Position
13:complement(589091..597966)
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AA seq
812 aa
AA seq
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MAHRKPKYRYGLLETPETSDFGDETTLQSSTVCDSTFHKTIEQAGPSNRANISPFTPTTP
KCNYVFVAKSNFQANSSDNCTPKNRVKLSHNFTDRTLLASDEASTSSKSSTPVFQVPSGY
PPKRVGSFPNVAQRTPIFRPNSRAPSSSNLTKSTPRRSIVTPSGYKSTPRTTPRSRNTPK
VSETPRNNDPSIVVTIVEGRGLARGEIGMASIDLKNPILTLSQFSDSQTYVKTLTKLQIL
SPIEIVFPSTMCDNGSMTQVFKFVNENFQSSNITTVQRHYFNETNGLDMIKRLVMRENSS
VVMDVTAKYYCLAASAALIKYVEFVQNTIYASESLRIVFKGSEQTTLIDAGTSSVLELAV
NLNDPKSDQSLYGVLNHTKTQGGSRLLRCNVLQPPNDVETIQGRLDCVEDLSNSSELFFG
ITALCINNTFLFSHSLVTELLSEVRTCIGCLYNLSEIVSTLDMLMSFAHVRTVTDCVRPE
FTDTLAVKSGRHPVLDRVLPSLVPNNIYAADGTNFSVITGPNMSGKSTYLKMIALLQVMA
QIGCFVPADFASFRISDQIFSRIGSDDDMETNSSTFVLEMKEINYILQNCEGNSLILIDE
LGRGTSTEEGIGLCWAISEFLLVQKSFTFFATHFLELCRLETIYPNVENYHMQIQHIVSA
KGSLRKVSYTYVLSKGHTEEKHYGLQLAELFNFPSSVMSQAREIAASMQETSDTADIVTT
AERKKDNADYRFATKLLQVSRSSKLSSEALKEYLKRLREEYEKEISINITSPNPDNETGK
TPPEDQPLAPVSSLFEKSNSAYQMVPESGISV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcacataggaaacctaaatacagatacggacttcttgaaactccagaaacatccgat
tttggcgacgaaacaacattgcaatcttccacagtatgtgacagtacgttccataaaaca
atagaacaagctggaccttctaaccgagctaatatatcaccatttacacctactacacct
aaatgcaactatgtttttgtcgcaaaatcaaattttcaagctaattcaagtgataattgc
acaccgaagaacagagtgaagttatcacataactttacggacaggactctccttgcttct
gatgaagcttctacttccagcaagtcaagtaccccagtgttccaggtacccagtggttac
cctccaaaaagagttggatcttttcctaatgtagcacaaagaacaccaatcttcaggccg
aatagcagggcacccagttcttctaatttgaccaagagcacgcccaggaggtctatagtt
acacctagtggatataaaagtacaccacgaaccacgccacgtagtcgtaacactccgaaa
gtatcagaaacgccaagaaataatgatccttcaattgtggtgaccattgtagaaggcagg
ggtctagccagaggcgaaataggaatggcttcaattgacttaaaaaatccaattctgacg
ttatcccaattttcggactctcaaacttatgtgaaaacgctcacaaagcttcagattttg
tctccgattgaaatagtttttccaagcacgatgtgtgataatgggagcatgacacaagtg
ttcaaatttgtgaatgagaattttcagagttctaacataacaaccgtacaaagacattac
tttaatgaaacaaatggtcttgatatgattaaaagattggtcatgagggaaaatagctct
gtggtaatggatgtaacagctaaatactactgtcttgcagccagtgcagcattgataaaa
tatgttgaatttgttcaaaacacaatatacgcatcagaatcattgaggatcgtattcaaa
ggcagcgaacaaactactttaatagatgctggtacttcttctgtgttggaactcgctgtg
aatctaaatgacccaaaaagcgaccaatctttatatggtgttctgaaccacacaaagaca
cagggaggatcccgtcttctccgatgtaacgtcctccaacctcctaatgatgttgagacc
atccaagggaggctagattgcgtggaggatctttcaaactcttcagagctcttctttggg
ataactgctttgtgtattaacaatacctttcttttttcccacagtcttgtaacagaactc
ttatcagaagtgcggacttgtataggatgtttatacaacctatctgagattgtatctaca
ctagatatgcttatgtcatttgctcatgttagaacagttactgattgtgttcgtcccgaa
tttacggacactctggcagttaaaagtggtcggcaccctgtgttggatcgtgtgctgcca
tctttggtcccaaacaacatatacgcagctgatgggaccaactttagcgtgattacggga
ccaaatatgagtggcaagtcaacttatttgaaaatgatagcgttattacaggtgatggca
cagatcggatgtttcgtcccagctgactttgcatctttccgcatctcggatcaaatcttc
tcgaggatcggaagtgatgacgacatggagacgaactcttctacgtttgtgctcgagatg
aaagagataaactacatcttacaaaactgcgaaggcaacagtttaattctaatcgatgaa
ttaggccgcggtacatcaactgaagaaggaattggactatgttgggctatttcagaattc
ctgctagttcaaaagtctttcacattttttgcaactcattttcttgagttgtgtcgtttg
gagacaatttaccccaacgtggaaaattatcatatgcagatacaacacatagtatctgcg
aaaggcagtttacgaaaagtaagttacacttatgttttgtcaaaaggacacacagaagaa
aaacattacggtctacagttagctgaattgttcaattttccatcctctgtgatgtcacaa
gcgcgggaaatagcagccagtatgcaagagacttcagatacggctgatattgttacaact
gctgagaggaaaaaggacaacgctgactacagatttgccacaaaattacttcaagtctct
agaagttctaagttaagcagtgaagctttaaaagaatatctgaaaaggttacgagaagag
tatgaaaaagaaattagtataaatataacatcgcctaatcctgataatgaaactggtaaa
acaccgccagaagatcaaccgcttgcccccgtctcttccctgtttgagaagagcaactct
gcttaccagatggtgccagagagcggtatttcagtttga
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