Ciona intestinalis (yellow sea squirt): 100185733
Help
Entry
100185733 CDS
T01056
Name
(RefSeq) platelet glycoprotein 4-like isoform X1
KO
K06259
CD36 antigen
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04148
Efferocytosis
cin04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100185733
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100185733
04148 Efferocytosis
100185733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100185733
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100185733
04090 CD molecules [BR:
cin04090
]
100185733
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100185733
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of breast milk
100185733
CD molecules [BR:
cin04090
]
Proteins
100185733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
100185733
NCBI-ProteinID:
XP_002123211
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MKASGCCGKKCQIISSGLIGAVLVVLGGILMTVFDILYDHVISKQVAVVPGTVMYNLNWY
DVKTPVYRSFYLFNVTNKEEFLAQKPGKYVKPVLQEIGPYTYREFLAKDNIQYLEFNKTY
PEQVYYRQTAIFTFDQERSNGSETDVVTTLNFIIALLPGLIDHIFEEGPARDAIYTVFNK
LIRDTDSEILFTMTVGEYLFGFQDPLLTALLNIIAPGSDDVFGLFLLTNQSRGWRDYQVY
TGRHFPHLNNEITKYRNMSELPYWFGETCNMINGTDGTMTHPFMDKSKPTYFFIDEMCRS
LHAVYESDFTVEGIKGWKYSVPPEIFQSPLINEDNSCFCADLNHTVCQHSGAILVSSCYY
GVPLLVSLPHFLYEDGFYSEKLVGMNPKKELHEMVLVYEPTTGMIIKTESRIQLNIYMKP
NKKVKALNKIQEEFGFPLLWLNENAVLQPSEASWFSKLLYKVDDVVILLQVLICVLGAAL
MSLSLLCYLRCRKAYKTTKRAGSRKNLIIGQYNKDAELPTVTQNCVKF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaagtggatgttgtggtaagaaatgtcaaatcatttcaagtggtctgattgga
gcagtgttggttgtattgggtgggattttaatgacagtgtttgatattctgtatgatcat
gttatatcaaagcaagttgcagttgttccaggcacagtgatgtacaatttaaactggtat
gatgtcaaaactccagtctaccgaagcttttatcttttcaatgtaacaaacaaagaggaa
ttcttggctcaaaaaccagggaaatatgtgaagccagttctgcaggaaattggaccttat
acttacagggagtttttggcgaaagacaacattcaatatcttgagtttaacaaaacatat
ccagagcaagtatattacagacaaactgctatctttacatttgaccaggaacgaagcaat
ggaagtgaaactgatgttgttacaactttaaactttattatagctttgctacctggttta
attgaccatatatttgaagaaggcccagcaagagatgcaatttatacagtctttaataaa
ctaataagagacacagattcagagatcctatttacaatgacagtaggggagtatttgttt
gggtttcaagacccactattgacagctttgttaaatattattgctcctggatcggatgat
gtgtttggtttattcttgttgacaaaccagtcaagaggttggagagattaccaagtttat
acaggcagacattttcctcatcttaacaatgagatcacaaaatatagaaatatgagtgaa
ctgccgtactggtttggagagacatgcaacatgatcaatggaacagatggcactatgact
catccatttatggacaaaagcaagccaacctactttttcattgatgaaatgtgcagatct
ctgcatgctgtatatgaatctgactttactgtggaaggtataaagggctggaaatattca
gttcctcctgagatattccaatcacctctgattaatgaagacaactcatgcttctgtgct
gatttaaatcacacagtttgccaacattcaggggcaatccttgtcagcagctgttactat
ggtgttccccttcttgtttctttgccacactttttatatgaggatggtttctatagcgaa
aagttggttggaatgaaccctaaaaaggaattacatgaaatggttttagtttatgaaccg
accactggaatgattattaaaactgaaagtcgaattcaacttaatatttatatgaagccg
aataaaaaagtaaaagcactgaacaaaatacaagaggagtttgggtttcctttgttatgg
ttaaatgaaaatgctgtcctgcaacccagtgaagcatcatggttttctaaacttctgtac
aaagtagatgatgttgttatacttctgcaagttctaatttgtgtcttgggagctgcattg
atgtcactatctttgctctgctaccttcgttgcaggaaggcgtataaaactacaaagaga
gctgggagcagaaaaaacctcattattggacagtacaataaagatgcagagttaccaaca
gttactcaaaattgcgtcaagttttaa
DBGET
integrated database retrieval system