Ciona intestinalis (yellow sea squirt): 100185737
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Entry
100185737 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100185737
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100185737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
PMI1_PMIR1-2_C
Motif
Other DBs
NCBI-GeneID:
100185737
NCBI-ProteinID:
XP_004227530
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MFRVSNMADNEINLNTTVILERNSVLKAVKLVANKVIVFEKLRFKPDKAVGCNYGTVFKV
ANGEMEITDQDLDSLDTNADDAQGKDNRSLVDTHGKSQTIKRENILEMKGEGATGEEIVK
CLVENSSSFNEKTSFSQNKYLKKKKKKYLSYIRIQRPNSRLICQLYQEREPAKICNMRME
TMSQILTAANIKHGCNVGVVETCSGVVLGSVLEKLGGKGCVVNLHNGESPPNLFAISHFN
FPDKYWDENLHSIPLRTLGPILAKRSFESEFLTEKPTKVEAGSCIKQRPSDSDKSDNDIT
MDTVSEQSNGCDKTKGDNDIKVSGKRKKFSDEEKLAVRLERRENRLKHQQRAWGVLENKL
LDAVVVVCKFHPTPILLCLLDXLQLSRPFVVYSEHKEPLMELFVRLSISGSAINLQLTDT
LTRQYQVLPERTHPHVMMSSGGGYLLTGLKVKP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttagagtctccaatatggctgataatgaaataaatttaaacacgactgtaattctt
gaaagaaatagtgtcctcaaagctgtgaaactcgtcgcaaacaaagtgatcgtcttcgaa
aaattaaggtttaaacctgacaaggcagttggttgcaactatgggacagtttttaaagtt
gcaaatggggaaatggagataacggaccaggatttagattcattagacacaaatgctgat
gatgcgcaaggaaaggataacaggtccttggttgacacccatggtaaatcgcaaactata
aaacgtgaaaacatccttgaaatgaagggggaaggggcaacaggggaggaaattgtaaag
tgcttggtggaaaacagttcgtcgtttaatgaaaaaacatcattctcccaaaacaaatat
cttaagaagaaaaagaagaaatatttgtcttatattagaatccaaagaccaaacagtcgg
ttaatctgccaactttaccaagagcgcgaaccggcaaagatttgcaacatgagaatggaa
acaatgtcccagatattgactgcagccaacattaagcatgggtgtaatgttggggtggtg
gagacttgttctggggttgtgttgggttcggtgctggagaaacttggtggtaaaggttgc
gtagtgaatcttcataatggggaatcccccccaaacttattcgcgatctcccatttcaac
ttccccgataaatattgggacgaaaaccttcactcaatcccgttacgaactttggggccg
atcctcgcaaaacggtcgttcgaatcagagtttttgacggaaaaaccaaccaaagtagaa
gctgggagttgcataaagcaaagaccttctgattctgataaaagcgataatgatataaca
atggacactgtatcggaacaatcgaatggttgtgacaaaacaaagggtgacaatgacatt
aaagtttcggggaaaaggaaaaagttttcggacgaagagaaactcgcggttcggttggaa
agaagggagaatcgtttgaaacatcagcagcgagcgtggggggtgttggaaaataagttg
cttgatgctgtggtggtcgtgtgcaaattccaccccaccccaatacttctatgtttgttg
gacntcctccagttatcgcgaccattcgtcgtatattccgaacataaggaacctctcatg
gaattatttgtgaggttatcgatcagcgggtccgcgatcaatctccaacttactgacacg
ttaactcgacaatatcaggttctgcctgagcgcacacacccccatgtgatgatgtcatca
ggggggggttacctacttaccgggttaaaggtcaaaccatga
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