Ciona intestinalis (yellow sea squirt): 100185740
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Entry
100185740 CDS
T01056
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
100185740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Cadherin_3
Big_9
Motif
Other DBs
NCBI-GeneID:
100185740
NCBI-ProteinID:
XP_002119185
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MTPSNTSSSIISTGHEGVRDLIKFDVTDGFNPLIDRYFYVNVAFMDMLFPDVINKGVTLK
EGGRVTLTTDILSTADLNSADENLAFSIAQEPSRGHLESSDRPGVPITAFTQLDLAGNKV
QYVHTGDDEVKMDSFEFEVTDGFNPVYRTFRVSIADVDNKKPIVTIVGIRVKEGSTKLIT
PFELKVEDYDTVDALLRVHITQAPVHGRILLNEVTEVREFTMDDLNENRVSYSHDGSETV
ADSFSFTVTDGTHEDFYVFPSTVDSTDQPQRMDIEIVPVDNGVPQMLVNRGAPTVRELPS
GDRGFRITKKSLSADDRDSDVSLLTYVITKPLEHGNIVNVLNETGPIETFTQGDIDAMAI
YYILDSDTNATSDSFTFKVQDQGGNELTNQKFRFNWAFISLESTTYRIGETDKELVVELV
RRGYLGETAFVGIGTRDGSAKSSEDFRVRSASQVQFNPGQTRATWKVQILQDEKYEESEH
FYIELSEPVMAILEHPSNVTITITDAEDESTVFIPLAKYVVAEDSGELMIPVRRSGDVTN
ELMVICYTEPDTATGTIPTKVLSYSDYISRSEDHNSLITFERGETEKFCRIVIIDDSLYE
EDEAFSVKLVSPMGGRLGNFSTSEIVISADENDEPLFYFDSATYTVDEGAGHVDVRVWRT
GTDLSQTASITVQSKKSNPESARANEDYVGISQTLEFAPGITMQTVSVVILDDLGNPVLE
GEETFDLVLRMPMGAILGDPQVTQVTINDTESDLPIMEFAEATYEVNEIDGSLSAVILRS
GDLSQSSSVRCYTRQATAEVMMDYAERPNTDASIVRFEPGQTEARCAVVIEDDAIHEEPE
QFRLVLGSPISDIAGEARVGDKSETLIKINDDADRSIIEFPTTTFEVTEPATEDNVTIIR
IPVIRKGDTTKTSSVRFFTKDGNARSSEDYNPVSKELLFEPGVDEHVVEIEILYDDEKEI
RESFTVRIDPDVNMEAQLGNHKAIIYINQQRILADVTFPSVPSVISLLDYDDMAGATGQP
SPGYPVICVSPCNPKHSNYREVSSICDSEGLDDSATKFRWLVAAPSGDDGVTQPLREVAQ
RTFFTDVNRITLDSIYFKPGSRISCVARAVTIEGDVGLESTSQPITVSDDSEVCPPRFPN
SVGAEPFSAKIRYTGPTDPTHPNLIKVTVTMPHRDGMLPAISTRQLTNFEFTLSQDGTRV
GNHRCSNIINYNEIATQYGFLSEATRNPNVIGETYPYQYNTELRGNNTLRFYRNLNLEAC
LWEFTTYYDMSELLSECGGNIGTDGQVLDLVQSYVSLRVPLFVSYVYHSPIDTAWLHSDQ
QTELRLTFVYDTAILWEKGIGTPPEAELQGYLYPTSMRIRDDGRLVVNFRTEARFRGQFV
ASHPSSDNVAMVMSASHPELQMTLNNLRNEATYNNPEQKWSFVSDYAVRDYSGTYTIKLI
PCTTTADQSYDVPIVCNPREPLSFEMDIRFQQVSYPVAAEFSLNTDFFLLSKKSLYLSDG
SMGFAEDSDVAFVEGAEIYGRVLVDPVQNLGDSFDAHIEKVFICSGRDGYVPKYNPTNGE
YGCLADAPNLRNRFKVLDKEQPDTQDTEANNVPFNAKLAIDDNEALQIVRQAGTDGFRMD
SAPLFSVTVGREWYMHTIYTVKGTDNRKKRSNIHTYHSLVRSSHSRQRRAAAEIADTIGE
EKDRGTQMMHVKLDRASPPVLRDNSRRPSGVTTTDSKAGGFPLLAVIIGGVSLLVVVVMV
VGVVLYKRRGPSEATPAAAAAKTRYTGGKHIVTKKSGSGTKSAVVAGATSSSGYSSSDGS
EV
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgacaccatcaaatacgtcatcaagtataatatccacagggcacgaaggggttcgtgac
ctcatcaagtttgacgtcactgacggtttcaaccctctcatcgaccgctacttttacgtc
aacgtcgcttttatggacatgttgtttcctgacgtcataaataagggggtgacgttgaaa
gaagggggaagagttacattaactacagatattctcagcactgctgatttaaacagcgcc
gatgaaaaccttgcgttcagcatagctcaagaaccgtcacgtggtcatttagaatccagt
gatcgacccggtgttccgatcactgcgtttacacagcttgacttagcaggtaacaaggtc
caatacgtccacaccggtgacgacgaagtaaagatggacagcttcgagttcgaggtaacc
gacggtttcaatccggtctacagaaccttcagggtgtccatagccgacgtcgacaacaag
aaaccgatcgttacgattgtcggcatccgtgttaaagaggggtcgaccaaacttatcacc
ccttttgaactgaaagtcgaggattacgacacagtagatgcattgttacgtgttcacatc
acccaagctcccgtccatgggcggatattgttaaacgaagtcacagaagttcgggagttt
accatggacgacttgaacgaaaaccgagtgtcgtattctcatgacggatcggaaactgtg
gccgattcattctcgtttactgtaactgatggaacgcatgaggatttttacgtcttcccc
tcaaccgtggatagcacagaccaaccacagcgaatggatattgagatcgttcctgtggac
aacggggtacctcagatgttggtgaatagaggagcgccaactgtgcgggaactgccaagc
ggcgatcgtggattcagaatcaccaaaaagtcgctcagcgctgacgacagagattctgac
gtcagtttacttacatacgtcatcacgaaaccactggagcatggaaatatcgtcaacgtt
ttaaacgagacgggtcccatcgaaacattcactcaaggagacattgacgcgatggctatt
tattacatcttggattccgacacgaacgctacgagcgattcattcactttcaaagttcaa
gatcaaggtggaaacgaactcacgaaccagaagttccgtttcaactgggcattcatctcg
ctcgagagcaccacctaccggatcggtgaaacggacaaagagcttgtggtggagttggtt
agaaggggttatctcggtgaaacggcgttcgtaggtattgggactcgggatggtagcgcg
aaatcttccgaagatttccgagttcgctcggcaagtcaagtccagtttaacccgggtcaa
accagggcgacatggaaagttcaaatattacaggacgagaaatacgaagaatctgaacac
ttctacatcgaactgagtgaaccagtgatggcgatcctggaacacccgagcaacgtcaca
atcaccatcaccgatgcagaagacgagtcgaccgtcttcatcccccttgcaaaatacgtg
gtagcggaagacagcggtgaacttatgatccctgtgcgtaggtctggtgacgtcactaat
gaactaatggtcatttgttatacagaaccagacacggccacaggaaccatcccaaccaaa
gttctctcttattccgattacattagtcgatccgaagaccacaacagtcttatcacattt
gaacgcggggaaacggagaagttttgccgcatcgttataatagacgattcgctttacgag
gaggatgaagctttcagtgtaaaacttgtgtcgccaatggggggaaggctgggcaacttc
tctacatctgagattgttatatctgctgatgagaatgacgagccgttgttctacttcgat
agcgccacctatacagtggatgaaggtgctggtcacgtggacgtgcgtgtgtggcgaacc
ggaaccgatttgtcgcaaactgcctccattactgttcaatcaaaaaagagcaacccggag
tcagccagagcgaacgaggattacgttgggatcagccaaactcttgaatttgcacccggt
atcaccatgcagactgtgagtgtggtgatacttgatgatcttggtaacccagtattggaa
ggcgaagaaacattcgatctcgttcttcggatgccaatgggagcaatccttggtgatcct
caagtcacccaagtcaccatcaacgacaccgagtccgatcttccaattatggagttcgct
gaggcaacttatgaagtgaatgaaatcgatggatccttgtcagctgtcatcctgcgctct
ggcgacctctcgcagtcatccagtgttagatgttacacccgccaggcgacagcagaggtc
atgatggattacgctgagcggccgaacactgacgcgtctattgttcgtttcgaaccaggg
caaaccgaggcccgatgtgctgtagtaatagaagacgacgcgatccacgaggaaccagaa
caattccgtcttgtgcttggctcccccatcagcgatattgccggtgaagccagggttgga
gacaaaagcgaaactttgatcaaaatcaacgacgacgcggatcggtccatcatcgagttc
ccgaccacgacattcgaggtgactgaacccgcaactgaggacaacgtaacaataatacgt
attcctgtcatacggaaaggcgacacgacaaaaacatcgtccgtcagattcttcacaaag
gatggtaacgcgcggtcaagtgaagactacaatcctgtcagcaaagagcttctgttcgaa
cctggtgtcgacgaacacgtggtggagatagagatcctttacgacgacgagaaagaaatt
cgtgaatctttcaccgtgaggatcgatcccgatgtaaacatggaagctcaacttgggaac
cacaaagccatcatatacatcaaccaacaacgtatacttgctgacgtaactttcccttcc
gtaccttcggttatttcacttcttgactacgatgacatggccggtgcgacaggacaacct
tcaccgggatacccagtcatttgtgtctcgccatgcaacccgaaacacagcaattacaga
gaagtctcttccatttgtgacagtgaaggattggacgattcggcaacaaaattcaggtgg
cttgtggctgctcctagtggcgatgatggcgtcactcaacccctccgcgaggtggcgcaa
aggaccttttttaccgacgtcaatagaattacgttggatagcatttacttcaaaccaggg
agtcgaatctcatgcgtggctcgcgcagttacgatagaaggagacgttggtcttgaatct
acgtcacaacctattacagtgagtgacgacagcgaagtatgtccgccacgtttccccaac
tctgttggagcggaacctttctctgcaaagatccgatacactggccctactgacccaacc
caccccaaccttatcaaagtaactgtgacaatgccgcaccgagacggaatgttaccagcc
atcagcacgcgacaactcaccaactttgagttcacgttaagtcaagatggtacaagggtg
gggaaccataggtgttccaacataatcaactacaacgagatagccacacagtatggtttc
ctcagtgaagcaacccgtaaccccaacgttattggagagacttacccctaccaatataat
acagagttacgagggaataacacactgaggttttatagaaacctgaaccttgaggcttgc
ttatgggagttcaccacctactatgatatgtcagagcttctcagcgagtgtgggggaaat
attgggacagacggacaggtgttagatctggtccaatcctacgtttccctccgtgttcct
ctcttcgtatcgtacgtctaccattcccccatcgatactgcatggttgcattccgatcaa
caaaccgaactccgtctcacgtttgtttatgacactgccatcttgtgggagaagggaatt
gggactccccctgaagcggaactacaaggatacctttaccccacaagcatgaggattcgt
gacgatggtcgcttggttgtcaacttccgcacggaggcgagattccgaggtcagttcgtt
gccagccaccccagctcggacaatgttgccatggtaatgagtgcgtcacatccggagtta
cagatgaccttgaataacctccggaatgaagcgacatataataaccccgagcagaaatgg
tcgttcgtgtcagattatgcagttcgtgattattctggcacgtacacgatcaagttgatt
ccgtgcacaacaacggctgatcaatcatatgacgttcctatcgtgtgcaatccacgtgaa
ccgttgtcgttcgagatggacatcaggttccaacaggtgagttaccccgtggccgccgag
ttcagtcttaacaccgacttcttcctcctgagcaagaaatcactttatttgagcgatggc
tcgatggggtttgccgaagacagcgacgtcgcttttgttgaaggagctgaaatctacgga
cgtgtgttggtggacccggttcaaaacctcggtgattccttcgacgctcatattgagaag
gttttcatctgcagtgggagagacggttacgttcccaaatacaatcctacgaatggtgaa
tacgggtgccttgcagatgcgccgaacctcaggaatagattcaaagtcctggacaaggaa
cagcccgacacgcaagacaccgaagccaacaatgttcctttcaacgccaaactcgccatc
gacgacaacgaagctttgcagatagtcaggcaagctggcaccgatggttttcgaatggat
tccgctccattgttttcggttacagttggtcgggaatggtacatgcatactatatacaca
gtgaagggaacggataatcgaaagaagcgatccaacattcatacttatcattcactcgtc
cgttcatcacatagcaggcaacgaagagctgctgcggagattgccgacaccatcggggaa
gagaaagacagaggaacccagatgatgcacgttaaactagatcgagcaagtccgccagta
cttagggataactcacggagaccgtctggggtgacaacaacagatagcaaagctggtggc
ttcccattgctggctgtgattatagggggagtctcgcttctcgttgttgttgtgatggtg
gtcggggttgttttgtataaacggcggggaccaagtgaagcaactcccgccgccgctgcc
gcaaagactcgttacactggaggtaaacatatagtgacgaaaaagagtggatccggtacg
aaatcagcggtggtggccggagcaacaagcagtagcggttacagtagctccgacggctcc
gaagtttga
DBGET
integrated database retrieval system
