Ciona intestinalis (yellow sea squirt): 100185799
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Entry
100185799 CDS
T01056
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100185799
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100185799
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100185799
03029 Mitochondrial biogenesis [BR:
cin03029
]
100185799
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
100185799
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100185799
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100185799
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100185799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
100185799
NCBI-ProteinID:
XP_026689616
Ensembl:
ENSCING00000008937
LinkDB
All DBs
Position
3:5322925..5326624
Genome browser
AA seq
678 aa
AA seq
DB search
MGDADAEKVLAPLRLHVKEQGDIVRGLKESGATTIDIERAVAELKARKRQLLNKENELVA
KEDFPRQQMEDTLKRRFFYGQAFELYGGVSGLYDFGPVGCMLKNNIISEWKQHFILHDQM
LEIECTMLTPEPVLRASGHIERFADLMVKDEKTGACFRADHLLEGHIEKLMQDKKVGLDV
KEKCKTVLQQLDNYGKEELGTLMREFEVKSPVTGNEISDPMDFNLMFQTTIGPGNAMPGY
LRPETAQGIFLNFKRLLEFNQGKLPFSAVQIGMSFRNEISPRSGLIRVREFQMGEIEHFV
DPLRKEHPLFSTVKDIKVPLYSSKAQLNGEAPSVRTLGSAVEDGTIDNETLGYFMGRIYL
FCVKVGIDPFKFRFRQHMQNEMAHYACDCWDAECKTSYGWVECVGCADRSCYDLKCHSQA
AKVNLSAERPLPEPVQRDVVSLSCNKQAVGKAFKKDAKKVQAHLEGLSEEEIVNLETEMT
ANSVYVYTHSDGGKFNVLPGMVAVKRTKKTFQVEEFMPSVIEPSFGFGRLLYSTLEHNFK
IRAADEQRTFFSLPAVIAPYKCSLLPLSNKPDFNPFITSLSLALKKLGISHKVDTSSGSI
GKRYARTDEIAVPFGITVDFDTVKIEPHTATLRERDSLVQIRATVEEIPQIVYDLVQENT
TWEEVMKKYSVFEEQINK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgcagatgcagaaaaggtcctcgcgcctctacgtcttcatgttaaggagcag
ggagacatcgttcgaggattaaaagagagcggggccacaacaattgacattgaaagagca
gttgctgagttgaaagcaaggaaaaggcaactgcttaacaaagagaatgaattggttgca
aaggaggattttccaagacagcagatggaagatactttgaagagacgattcttctatggc
caagcttttgagctgtatgggggtgtaagtggcttgtatgactttggtccagtgggttgc
atgttgaaaaataacatcatttcagagtggaagcagcattttattttgcatgatcagatg
ctggaaatagaatgtacaatgctgacaccagagcccgtattacgcgcttcaggtcacatt
gagaggtttgctgatctgatggtcaaagatgaaaaaactggtgcttgctttcgtgcagat
catttgctcgagggacatattgaaaagctgatgcaagacaagaaggttggtttggatgtg
aaggaaaagtgtaagactgtattgcagcagctggacaactatgggaaagaggaattggga
actctaatgagagagtttgaagtcaaatcaccagtgactggcaatgaaatttcagaccca
atggattttaatctaatgtttcaaaccactattggaccaggcaacgcaatgccaggatat
cttagaccagaaactgctcagggaattttcctcaattttaagagattgttggaatttaat
caaggaaagttaccattttcagcagttcaaattggaatgtcgtttagaaacgaaatttcg
ccaagatctggcttaattcgggtgcgggaatttcaaatgggtgaaattgagcattttgtt
gatcctttgcgcaaagaacatcctttgttttcgacagtcaaggatattaaagtccctctt
tactctagcaaggcacaattgaatggagaagcaccttcagttaggacccttggatctgca
gtagaagatggaacaattgataatgagacactcggatactttatgggcaggatttatctc
ttttgtgtcaaagttggaatagacccatttaagttcagatttcgtcagcatatgcagaac
gaaatggcccattatgcctgtgactgctgggatgctgaatgcaaaacatcatatgggtgg
gtggagtgcgttggttgtgctgatcgttcgtgttatgacctaaaatgtcattcgcaagct
gctaaagttaacttgtcagccgagaggccccttcctgaacctgtccaaagagacgtggtt
tctcttagttgcaataagcaagctgtgggaaaagcttttaagaaagatgccaagaaagtg
caagcgcatttagaaggtctcagtgaagaagagattgtgaatttggaaactgaaatgact
gctaattctgtgtatgtttatactcattcagatggtggaaagtttaacgttctaccagga
atggtggcagtaaaacgcaccaagaaaacattccaagtggaagaattcatgccttctgtc
attgaaccttcatttggatttggaaggctgctttattccacattggaacacaattttaaa
atccgagctgcagatgaacagcgtacgtttttctctcttcccgctgttatagctccttac
aagtgttctttgcttccgctaagcaacaaaccagatttcaacccctttattacatcatta
tctttagccctgaagaaactcggcatctcacataaggtcgacacttcatctggttcaatc
ggcaagcgttatgcacgtactgatgaaatagctgttccctttggtatcaccgttgacttt
gatacagtgaagatagaaccgcatactgcaactttgagagagcgtgacagcttggtacaa
atcagggcgactgttgaagaaattcctcagattgtttacgatcttgtgcaagagaataca
acctgggaagaagtgatgaaaaagtactctgtgttcgaggaacaaattaataaataa
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