KEGG   Ciona intestinalis (yellow sea squirt): 100185855
Entry
100185855         CDS       T01056                                 
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100185855
Spliceosome [BR:cin03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100185855
SSDB
Motif
Pfam: Coilin_N Tudor_Coilin
Other DBs
NCBI-GeneID: 100185855
NCBI-ProteinID: XP_002121518
LinkDB
Position
3:4539654..4541769
AA seq 569 aa
MASCKDKKLRVRLRFDIAPPSCPSCKCFMFLVDRDAARYVSDVEHTIAKKFGFSSPRYLV
LSINDFVLLSSDDVEVIRDDDDIQVKIDHALKDDEQNTNADVVAVKTKSKKRICEDSNER
PSKKVKKIEQTKLNKRSKIVEQRKRVVRKKKPKILKKIGPTPKSVESRPSKLKTPSVQSS
ESSSSDYSEDMLLKPHSLIKRQINQSSSSSTDSSDEKTKNISKTNKLSKPAAKFNLYSSV
LKTKPKTQSLFNKNTSSSSEDTSSSDSDDVPNAKPQPPKTTPAKSNNVVTKQVQAPSSDS
SSDSDSESDTLSVTAVKSNLSFTVSKLNPKTQPPISSSSDDDSTSDSDNEPIIATHKSTI
PAALKPNVVVRQGETSSSDDDSDSGEEKKVLQSCKNNADNKVLPSQKNLINKSWENREKL
NAMRAYPNYHNKSVVLTCSGNVNDKEIAMETESKPADAIAKPLVNDYSTLMSLSWPPRVK
DKIAYQALEMSPIDYTPNVSEYKEAEVVNVSNDKQITVKILYQEKAPANLEVPGRFELVY
EEEEHSEDQSEDDTITLDWTSLMNVKLIQ
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcaagttgtaaagataaaaaactccgagtgaggcttcgtttcgatattgcaccacct
tcttgcccgtcatgcaaatgttttatgttcttggttgaccgagacgctgcacgttatgtc
tctgacgtggaacatacaattgcgaaaaaatttggcttctccagtcctcggtatcttgtt
ttatcgataaacgatttcgtgctactgtcaagcgacgacgtagaagtgattagggatgat
gatgatattcaagtaaaaattgatcacgcattaaaggacgacgagcaaaatacaaacgca
gatgttgttgcagtaaaaacgaaaagcaaaaagcgtatttgtgaagatagcaatgaaaga
ccttcaaaaaaagtgaaaaagattgaacaaaccaaattgaataaaaggagtaaaattgtt
gagcagcggaaaagagttgtgagaaaaaagaaacctaaaatattaaagaaaataggccca
actcctaaatctgtagagagtcgtccatccaagcttaaaactccatcagtccaaagcagt
gagtcatcaagtagtgattattctgaagacatgctacttaaaccacatagtctgattaaa
agacaaataaaccaaagttcgtcttcatcaacagattccagtgacgaaaaaacaaaaaac
atttcaaaaacaaacaaactttcaaaacctgcagcaaaatttaacctttattcttctgta
ttaaaaactaaacctaaaacccaatccttgttcaacaaaaataccagcagcagcagtgag
gatactagtagttcagacagtgatgatgtacccaatgctaagccccaaccccctaaaaca
acccctgcgaaatcaaataatgttgtaactaaacaagttcaagcaccatcctcagattca
agcagtgattcagattcagaatcagacacattgtctgtaactgcagtaaagtcgaacctg
tcatttactgtatcgaaattaaaccctaaaactcaaccaccaattagtagtagtagtgat
gatgatagcacctcagacagtgataacgagcctatcattgctacccataaatcaacgata
ccagccgctttaaaaccaaatgttgtggttaggcagggtgaaaccagttcttcagatgat
gattctgattcaggagaagaaaaaaaagttcttcaaagttgtaaaaataatgctgataat
aaagttttaccttcacaaaagaatttaataaacaaaagttgggaaaaccgggaaaaacta
aatgcaatgagggcgtatccaaattaccataacaagtctgttgtactaacatgcagtggt
aatgtaaatgacaaagaaatagcaatggaaactgaaagtaaacctgcagatgcaattgca
aagcctctggttaatgactacagtactttaatgagtttatcatggcctccaagggtaaag
gataagattgcatatcaagcactagaaatgtcacccatagattacacacctaatgtatcc
gaatacaaagaagctgaagttgtaaatgtttccaatgataaacaaatcactgttaagatt
ctttaccaagaaaaagctcccgcaaatttagaagtcccaggaagattcgagcttgtttac
gaagaagaagagcacagtgaggatcaatctgaagatgacaccattacacttgattggaca
tctttaatgaatgtcaagcttatacagtga

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