Ciona intestinalis (yellow sea squirt): 100185864
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Entry
100185864 CDS
T01056
Name
(RefSeq) anoctamin-5 isoform X2
KO
K19480
anoctamin-5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100185864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100185864
Ion channels [BR:
cin04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
100185864
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Ortholog
Paralog
GFIT
Motif
Pfam:
Anoctamin
Anoct_dimer
SUR7
AcfD_helical
Motif
Other DBs
NCBI-GeneID:
100185864
NCBI-ProteinID:
XP_002123763
Ensembl:
ENSCING00000019497
LinkDB
All DBs
Position
8:complement(6068351..6085543)
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AA seq
938 aa
AA seq
DB search
MHCLFKVSNNGVCQYIITTNRGQIAIKNASYCKTVRPRVNMPRICCCCDCLDSLFRELDE
RPKATLYFHDGVRFIDYVIAYQDNDEHEHDKDDGQRQHYEENLEKAGLMLEREPKEQSQD
QNTYFVKVHVPWPILLKYAERMKMKMPLKEERREEFMKDSSEICGCVKTLYRKLVAPCVL
NTEEMTEMEEPDYYTTEFVRDKMDFFDIQDEKSFFANSQRSRIAHRIMSETRYGPKRVNI
GINNLISSGVYECAFPLHEGKHKSTESKLAINANMRRLLYWEWARWGRWYKFQPLDLIRL
YLGDKVAIYFAWLGYYTEMLFYPTIVGFIVFIYSIIAVWFYAPTQEICDETYPTYAGNLT
MCPLCDEDCSYWKLKTSCLAARITYVFDNEATIFFAIFMSLWATMFLEFWKRRQFELSYE
WDLVDYDEQRDLVRPEFEAQVTKERLNPVTGDMEPYLAAKDKYTRTCLSLVTVFFWILVV
IAAVFAVIVYRLAISAIFAVSVDLSSLGAIGTFATPAMLTTITASMLSLVIIMCLNKVYE
KVAIWLTNMELPRTQTEFEDRFTFKMFCFQFVNFYSYLFYIAFFKGTISGTPGHYTYLFG
SWRWEQCDAGGCMYELSIQLIIIMFGKQLWNNFIELVMPWLQHKYRQWKSQKVSTEMKDN
EYTRWEQDYDLNQFTEMGLFYEYLEMVIQFGFVTLFVAAFPLAPVLALVNNIIEIRLDAN
KFICELRRPLAHKCSDIGAWYYLLEFIGNLAVVTNAFTIAITSEAIPKLVYYYVYSLDIY
PSSTYNGYVNNSMSYFNTSDFEARSMPNNPDPFGEGNITTCRYPGYLSPPTASPKYEYTT
QYWHNIAGKLAFVIVVEHVVFFLKRLLDYLIPDRPRKLRDKIKREHFLVQHMLFKAETQQ
LLKQLSQDNEGTRELSPAPRSSTKQFYSVENEKETTPF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtttgttcaaggtcagcaacaatggtgtctgtcaatacataatcaccacaaat
aggggtcagattgcaattaaaaatgcaagttattgcaagacagttagacctagagtaaac
atgcctcgtatttgttgctgttgtgattgccttgacagtctatttcgtgaactggacgag
cgaccaaaagcaactctctatttccacgatggtgttcgtttcatagactatgtgattgcg
tatcaagacaacgatgagcatgaacatgataaggacgatgggcaacggcaacattacgaa
gaaaatctggagaaagcgggtctgatgttggaacgagaaccgaaagagcaatcgcaagac
caaaacacatactttgtgaaagtgcatgttccttggcctattctgcttaaatatgctgag
agaatgaagatgaagatgccgttgaaggaagagaggagggaggagttcatgaaggattct
tctgagatttgtggatgtgtgaaaactttgtatagaaaacttgttgcgccttgtgtattg
aacactgaagaaatgacagagatggaggaaccagactactatacgaccgagtttgttcgg
gacaagatggatttctttgacattcaagacgagaaatcattttttgcgaattcacaaaga
tcacgaatcgcccaccgaattatgagtgaaacaagatacggtcctaagagagttaacatt
ggtattaacaatctcatatcatcaggagtgtatgaatgtgccttccctttgcatgagggc
aaacataagagcactgaaagcaaactagcaatcaatgcaaacatgagaaggttattatac
tgggaatgggcaagatggggaaggtggtataagtttcaaccacttgatttgataaggttg
taccttggcgacaaggtagctatctactttgcatggttgggctactacactgagatgttg
ttctaccccaccattgttggatttatcgtcttcatttacagcattattgctgtatggttt
tatgcgccaacccaggaaatttgtgatgaaacgtacccaacgtatgctggtaatctaact
atgtgcccactgtgtgatgaagattgtagctactggaaattaaagacatcttgtcttgct
gcgaggataacatacgtgttcgacaatgaagcgacgattttctttgctatctttatgtca
ttatgggccactatgttccttgagttttggaaacgccgacagtttgagctttcgtacgaa
tgggatttagtcgattacgacgagcagagggacctcgtacggcccgagttcgaagctcaa
gttacgaaggaacgactaaacccggtaactggtgacatggagccgtatttggcagctaag
gacaaatacacaaggacatgcttgtctcttgttaccgtgtttttctggatcctggtggtt
atagctgcggtatttgctgtcatcgtatacagattggcaataagtgctatatttgctgtc
agtgtggatttatcttcactgggagccataggaacctttgcaacacctgctatgctaaca
accatcactgcttctatgctgtctcttgttatcattatgtgtcttaacaaggtgtatgaa
aaagtagcgatatggctgactaatatggagctcccgcgaacgcagacggagttcgaggac
cgttttacgttcaagatgttttgtttccaatttgttaacttttattcctatctcttctac
atcgctttcttcaaaggcacgatatctgggacccctggacattatacttatctattcggc
tcatggagatgggaacaatgcgatgctggtgggtgtatgtatgagttgtccatccaacta
atcatcatcatgtttggaaaacaactttggaataactttattgagttggtgatgccatgg
ttgcaacataaatacagacaatggaagtcccagaaagtttcaactgaaatgaaggacaac
gaatatacgagatgggaacaggattatgatttgaatcaattcaccgagatgggattattt
tatgaatatcttgaaatggtaatacagttcggcttcgtcacattatttgtggctgcgttt
cccctcgcaccagtgcttgcacttgtaaacaacattatcgagatcagacttgatgcaaat
aagttcatctgtgaactcaggcgaccattggcacacaaatgttcagatattggagcttgg
tattatttactggagttcattggtaaccttgcagttgtcacaaatgcgttcacaattgct
ataacatcagaagcaatacctaagctggtttattattatgtttattcacttgatatatat
ccttcctctacatataatggatatgtaaacaacagtatgtcatatttcaacacatctgac
tttgaagcacgcagcatgccaaataatcctgatccattcggtgaaggcaatatcacaact
tgcagataccctggttatctctccccgccaacagccagccccaaatatgaatacacgacc
caatattggcacaacattgctgggaagctagcatttgttatcgtggttgagcatgttgtg
ttctttctgaaacgattgttggactacctcataccagacagaccacgtaaactacgagat
aagataaagcgagagcatttccttgtacaacatatgctgttcaaagctgaaactcaacaa
ttgctcaaacaactttcacaagataacgaaggcactagagagctatccccagcacctcgg
tcttctacgaagcaattctactcagttgaaaatgaaaaagaaacaacgccgttctga
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