Ciona intestinalis (yellow sea squirt): 100185883
Help
Entry
100185883 CDS
T01056
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100185883
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100185883
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100185883
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
100185883
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100185883
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100185883
Prokaryotic type
100185883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
100185883
NCBI-ProteinID:
XP_002125465
Ensembl:
ENSCING00000024107
UniProt:
H2Y1Z9
LinkDB
All DBs
Position
2:complement(1031062..1034278)
Genome browser
AA seq
967 aa
AA seq
DB search
MDASLNSKQLRQMFLSFFQEKYAHTYIHSSSTIPLDDPTLLFANAGMNQFKSIFLGTISP
ADPLSKCKRVVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGCWSFGDYFKKDAINWAW
ELLTEVLKIPKDRLYATYFEGSEEYNVPVDTEVQNLWLQHLPADHILPGNMKDNFWEMGD
VGPCGPCTEIHFDRIGGRNAAHLVNMDDPEVLEVWNLVFMQFNREKDGKLKLLAKQHVDT
GMGLERLVSVIQGKLSNYDTDMFTPLFKAIQLGTGAREYQGKVGKDDVDGVDMAYRVLAD
HIRTLTIALSDGGRPDNVGRGYVLRRILRRATRFAVEKLNAKPRFFSSLVHVVVDILGEA
FPEIIRDPQMVIDIIDEEEEQFLKTLNRGRKILNQKIKSLDADAKVFPGETAWLLYDTYG
FPFDLTEIMAEESGLTVDCESFEKAKAQARITSKGFAQDVADTICLDVHMLTDLKEKKFP
PTDDSFKYQYSSNDNGEYSFPACTGVVKAILQNKTFVTSVSSGAECGILLDKTCFYAEQG
GQLFDLGYFKKQEDEFTEFTVKNCQVQGGYVLHVGTVAGTLEVGDSVELFIDEQRRQSLM
KNHSCTHILNFGLRCVLGEADQRGSLVAPNRLRFDFTAKKAMTSQQVKETEDVCNQIVNK
DEVIYAKPVPLDQAKAIHGLRAIFDETYPDPVRVLSVGVSVDSLVADPNFDAAMNTSVEL
CGGTHLLRSGHADKFIIISEEAISKGVRRIVAVTGQEALKAERKANLLAKSFETIKSEVE
KGLVNNKENYKTFSKKCTDFIELVSQASISQWRREEMRGFASSLKKKVDDVDRVMKENAT
KLALAQTKESIQQDPNATFVVTELKTNGNAKSLNEALKIYKSESPDTSVMLFSIDKEANK
IVCLSQVPASANDKGLTANGWVQSIATTLNGKGGGKSTSAQAVGRNPDGLNEAIQLAKEF
AKVKLAS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttctttgaattcaaagcaactgagacaaatgttcttatcgttttttcaagag
aagtatgctcatacttatattcactcatccagtacaatcccacttgatgatccaactctg
ctgtttgcaaatgctggtatgaatcaatttaaatccatatttcttggcaccatttcacct
gctgacccactatctaagtgcaaacgggtagtcaattcccaaaaatgtattcgtgctggt
ggcaagcataatgacttagatgatgtgggcaaggatacttaccatcatactttctttgag
atgcttggatgttggtcgtttggtgactacttcaaaaaagatgcaattaattgggcatgg
gagcttttaactgaagttttgaaaatccctaaagatcgactctatgccacttactttgaa
ggttcagaggaatataatgttccagttgatacagaagttcaaaacttgtggctccaacac
ttaccagctgatcacattttacctggaaacatgaaggataacttttgggaaatgggagat
gtaggaccatgtgggccttgcacagaaattcatttcgaccgaattggtggaagaaatgct
gcccatctggtaaacatggatgaccctgaagtgcttgaggtatggaatttggtgtttatg
cagttcaacagagaaaaagatggcaagcttaaactattggctaaacaacatgtggatact
ggtatgggccttgaaaggttggtgtctgtaattcaggggaagctttccaactatgacact
gatatgttcacccctttatttaaagcaattcaactcggaactggtgcacgtgagtatcaa
ggcaaagttggcaaggatgatgttgacggggtggatatggcttatcgagttttagctgat
catattcgcactttaactattgcgttgtctgatggtggtagacctgataatgtaggtcgt
ggatacgtactccgacgtatattgcggagagccactaggtttgctgttgaaaaattaaat
gcaaagccccgttttttttcaagcttggttcacgttgtggttgacattttgggagaagct
tttccagaaatcattcgagatcctcagatggtcattgacatcatagatgaagaagaggaa
caattccttaaaactttgaatcgtggcagaaaaatcctgaatcaaaaaattaagagtctt
gatgcagatgccaaagttttccccggtgaaactgcgtggctgttgtatgatacttatgga
ttcccatttgacctaacagagattatggcggaggaatctggattaactgtggattgtgaa
agttttgaaaaggcaaaagcacaagctcgaattacttcgaaaggttttgcgcaagatgtt
gctgacactatttgcctggatgttcacatgttgactgatcttaaagagaaaaagttccca
ccaactgatgacagttttaaatatcaatacagtagcaatgataatggtgaatattctttc
cctgcatgcacaggtgttgttaaagctattttgcaaaacaaaacctttgttacaagtgtt
tcatctggtgcagaatgtggtattttgctcgacaagacatgtttttatgcggaacagggt
ggacagctctttgatttgggttactttaaaaaacaagaggatgaatttacagagttcaca
gtgaagaactgccaggtacaaggtggttacgttcttcatgttggaacagtagcaggcacc
ctggaagttggagatagtgttgagttgtttatagatgaacaacgccgacaaagtttgatg
aaaaatcatagctgtactcatatattaaattttggtttacgctgtgttcttggagaagct
gatcaacgtggttctttagttgccccaaatcgattgaggtttgactttactgcaaaaaaa
gcaatgacgtcacagcaggtcaaagaaactgaagatgtctgtaatcagattgtcaataaa
gatgaagtcatatacgccaaacctgttcctcttgaccaagccaaggccatacatggtttg
cgtgcaattttcgatgaaacttatccagatccagttcgtgttttgtctgttggtgtttct
gttgacagtttagttgcagatccaaattttgatgctgccatgaacacatctgttgaactg
tgtggtggaactcaccttctgagaagtggccacgctgacaagtttattattataagtgaa
gaagccatttccaagggagttcgacgaattgttgcagtcactggtcaagaagcactgaag
gctgaacggaaagctaatttacttgcaaagtcatttgaaacaataaagagtgaagtggaa
aaaggcttggttaacaacaaagaaaactataaaaccttttctaagaaatgtactgacttt
attgaattagttagtcaggcaagtatctcccagtggagacgggaagagatgagaggtttc
gcttcatctttgaagaaaaaggtggatgatgttgatcgtgttatgaaagagaatgcaaca
aaacttgcattggcccaaactaaagaaagcattcagcaagacccaaatgcaacttttgtt
gttactgagttaaagacaaacggaaatgcaaaatctcttaacgaagctttgaaaatctat
aaatcagaaagtcctgatacctcagttatgctcttcagtattgataaagaagcaaataag
attgtttgtctcagtcaagttccagcaagtgcgaatgataaaggtttaactgcgaatggg
tgggttcaatctattgcaacaacactgaatggcaaaggtggtgggaaaagtacaagtgca
caagctgttggtcgcaatccagatggattaaatgaggcaattcaacttgcaaaggagttt
gccaaagtgaaactggcatcctga
DBGET
integrated database retrieval system
