Ciona intestinalis (yellow sea squirt): 100185885
Help
Entry
100185885 CDS
T01056
Name
(RefSeq) transcobalamin-2-like
KO
K14619
transcobalamin-2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04977
Vitamin digestion and absorption
cin04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100185885
04980 Cobalamin transport and metabolism
100185885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cobalamin_bind
DUF4430
Motif
Other DBs
NCBI-GeneID:
100185885
NCBI-ProteinID:
XP_002130272
Ensembl:
ENSCING00000016614
UniProt:
F6UPX6
LinkDB
All DBs
Position
11:3661419..3664786
Genome browser
AA seq
449 aa
AA seq
DB search
MNVLYLFVCLLVNSASCQTVCDGGPPSAVIEAKINEGIDRLMALRNQDWGWVNTPQAVLG
LQLGRPGSIFGLNMTLSKIETEIGSQSNRNVGKLALYAMALKAICEDPSNFRGINVMQLV
QQAMSAEFRSQNGTLNSKPRSHWYQLALGFQAQCVLGDSIVPIHLSKLIQYQNMNGSFGH
SSSVDVTSMALLALSCVRDRNEVADTPILASKVNLAIQKAIVFLGRSVISDRNNVWFGNK
YSTPGALLALKEANRDGGPNIQYCSHVVESMLRQPLAEEFSAAVAQMLPALNGNSVLSLM
GNVTCPTPDPIPDQYQPADVTSLVHSCNDFQLGNFFQEFFKVRINVRLSVITPDTNQVPY
NVIEVPNVEKDNTLLQVLQQAQCNTDIEFETLNTAWGAMLVSVNGVRANPNKREYWALVD
GSSGSFLPTGVSTYRPSDDEHIALKLATW
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttgtatctgttcgtttgccttttggtcaactcagcaagctgtcaaactgtg
tgtgatggagggccacctagtgctgtgattgaggcgaaaatcaacgagggcattgaccgc
ctgatggcgctgcggaaccaggactggggttgggtgaatacaccacaggctgtgcttggt
ttacaacttggacgacccggctcaatattcgggttgaacatgactttgagtaagatagaa
acagagattggctcccaatccaacagaaacgttgggaaacttgcattatatgcgatggca
ttgaaagcgatctgtgaagatccgtcgaatttcagaggaataaatgttatgcaacttgta
caacaagcaatgtcggccgagtttcgttcgcaaaatgggacactcaacagcaaaccgaga
tcacattggtaccaactcgcgcttggatttcaagctcaatgtgtgttgggtgattccatt
gttccaatacacctgtcaaaattgattcaatatcaaaacatgaacggaagctttggacat
tcttcctctgtcgacgtcacgtcaatggctctgttggcattgtcttgcgtccgagaccga
aatgaagttgccgacactccgatattggcatctaaagttaacctcgcgattcaaaaagcg
attgtatttcttggtcggtcagttatttctgacagaaacaacgtttggtttggaaacaaa
tattccactcctggtgccctcttagcgctaaaggaagcaaacagagatgggggtcctaat
atacaatactgcagtcacgtcgtggaaagcatgttacgacaaccgttggccgaggaattt
tcagcagcagttgcgcaaatgcttcctgctttgaatgggaacagcgtgttatcgttgatg
ggaaatgttacttgtccaacaccagacccgattcctgaccaatatcaacctgccgatgtc
actagtttggtacatagctgcaatgactttcaacttggaaactttttccaagaattcttt
aaagttcgaatcaatgtccgactttcagttataactcctgacacaaaccaagtcccgtat
aatgtaattgaggttcccaatgtggagaaggataatacattactgcaggttctccaacaa
gctcaatgcaacacagacatagagtttgaaacgctaaatacagcctggggtgcaatgctt
gtttctgtcaatggcgtacgtgctaatcctaacaaacgagaatattgggctctagtggat
ggtagttctggttcttttttgccgacaggtgtcagcacataccggccttccgatgacgag
cacattgcgcttaaattggcgacctggtag
DBGET
integrated database retrieval system