Ciona intestinalis (yellow sea squirt): 100185978
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Entry
100185978 CDS
T01056
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100185978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100185978
Spliceosome [BR:
cin03041
]
Common components
Common spliceosomal components
SR proteins
100185978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DbpA
SET_assoc
Motif
Other DBs
NCBI-GeneID:
100185978
NCBI-ProteinID:
XP_026694896
Ensembl:
ENSCING00000012370
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MSGSRVFIGRLSHRARENDVERFFKGFGKIRDINLKNGYGFVEFDDSRDADDAVYEMNNR
DLCGERVTVELARGVPRSSGGRDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAIGK
YGPPTRTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHKHRRNEGVVDFATYDDMKR
AIDKLDNTEINGRKIRLIEDRTLRSTSRSRSRSRSRSRSRSRSRSRRSRSRSRRRSSKRS
RSRSRSRSRSQHSSVNGDDKKERRDSRSRSRSPNVKNEGSRSRSRSPDNSYD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagtcgagtttttatcgggcgtttgagccatcgggcacgggaaaacgacgtt
gagcgatttttcaaggggtttggcaaaattcgtgacatcaatttaaagaatggatacgga
ttcgtcgagttcgatgacagtcgcgatgctgacgacgcagtatatgaaatgaacaaccga
gatctatgcggagaacgagtcacagttgaacttgcacggggcgtgcctagatcatctgga
ggaagagattatcgaccagacttcaggaacgactacagaaacgactacaggagacgggac
gacagaggaggtggcggaggtggaagagtgaattattttgacagccgtgccattggaaag
tatggtcctcccacacgaaccaactatcgggttattgtggagaatctatcaaccagggtc
agctggcaggatcttaaggattacttaagagaagctggtgaagtgacgtacgctgacgcg
cacaaacatcgccgtaatgaaggtgttgtcgactttgcaacatatgacgacatgaaacga
gcaatcgacaagttggacaacaccgagataaacggtcgtaagatccgactcatcgaggat
cgtactctgcgctcgacaagtcgcagtcggtcacgatcgaggtccaggtccaggtcacga
tctcgctcaagaagtcgcagatctagatcaaggtctcgtagacgaagtagcaagagaagt
cggtcacgatcaagatccagatctcgatcccaacatagcagtgtgaatggtgatgacaaa
aaagaacgtcgcgactcaagatcacgtagcaggtcaccgaatgtgaagaatgaaggaagc
agatccagaagtcgttcacctgacaatagttatgattga
DBGET
integrated database retrieval system
