KEGG   Ciona intestinalis (yellow sea squirt): 100186014
Entry
100186014         CDS       T01056                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100186014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cin04121]
    100186014
   03400 DNA repair and recombination proteins [BR:cin03400]
    100186014
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     100186014
   Cul5 complex
     100186014
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100186014
SSDB
Motif
Pfam: ubiquitin
Other DBs
NCBI-GeneID: 100186014
NCBI-ProteinID: XP_026690508
LinkDB
Position
5:2345523..2346499
AA seq 101 aa
MDVFFIIRREKTTIFADAKESSTVLDLKKIIQGILKVTPEDQVLYNACNDQALEDNKTLG
DSGFTQANAKAQAPALLKLALKDGGSATYMPFFNYIICKIV
NT seq 306 nt   +upstreamnt  +downstreamnt
atggatgtgttttttatcattcgtcgtgaaaagacgacaatatttgctgatgcaaaagaa
tcgagcactgtcttggatttaaagaaaattattcagggaatcctaaaagtcacaccagag
gatcaagtattatataatgcctgtaatgaccaggcactggaagacaataagactcttgga
gacagtggttttacacaagcaaatgcaaaagctcaggcacctgctctcctcaaacttgct
cttaaggatggaggtagtgcgacttacatgcctttttttaattatataatatgcaaaatt
gtgtaa

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