Ciona intestinalis (yellow sea squirt): 100186040
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Entry
100186040 CDS
T01056
Name
(RefSeq) mitochondrial Rho GTPase 1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100186040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100186040
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cin04031
]
100186040
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
100186040
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
100186040
GTP-binding proteins [BR:
cin04031
]
Small (monomeric) G-proteins
Rho Family
Miro
100186040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_7
EF-hand_6
EF-hand_1
AAA_22
EF-hand_5
MMR_HSR1
Arf
ATP_bind_1
SRPRB
EF-hand_8
NACHT
Motif
Other DBs
NCBI-GeneID:
100186040
NCBI-ProteinID:
XP_002130293
Ensembl:
ENSCING00000009241
LinkDB
All DBs
Position
5:complement(4933035..4935582)
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AA seq
626 aa
AA seq
DB search
MWKDIHILLLGEPKVGKTSLILSLVGEEFPEDVPDRVEEITIPGDVTPEKVPTHIVDFSE
KEQGEYQLCEEIAKANVVCLVYDLADLTTLEKIKERWMPLIKDCSMHESMLPIILVGNKS
DLISDSKMYEVIPIMNDFPEIETCIECSSKTLNNVSEMFFFAQKAVLYPTAPLYSPQDGD
LKPESKIALVRIFKLFDKDNDGVLNDDELSYFQKICFSTPLAMQALQDVKNVVKKNCPDG
IVDDSLTCDGFLYLHLLFVQRGRHETTWAVLRKFGYNGLLQINEDYLRPDLPPAPADTIP
QLTMDARKFLNEVFSKYDKDEDGALNPMEMDDLFSVFPYEPWGSEVLNTVCTNSKGWITR
AGFLSQWMLTTFIDAPRTLEYLGYLGYSALLDCASQAEAIHFTTNSTTHATDENNRDIFT
CKVIGVRGVGKSAFLQGLLETSENTKKSKHSQVSVFAVNEVQVKNLSPVYLLLHEVDVSD
LLAAGEGSFLCDVVCLLYDSTDADSFQCCVEVHKQFVVGSSVSCIVIATKADGKAVKQRC
ALQPVDFCLQNSLPPPIAFSSRQKSSTSVYETIAEMAAVPKSSTEHQTSALGIILKIGIT
TAILAGLGYGLYKYSNTFKKPNFLKS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggacatacatatcttgctgttaggcgagcccaaagtggggaaaacgtcgtta
atcttatctctcgtcggcgaagagtttcccgaagatgttccagatcgcgtagaagaaatt
accatacctggtgacgtcacaccggagaaggtaccaacacatatcgtagatttttccgag
aaagagcaaggcgaataccaactatgtgaagaaattgctaaagccaatgttgtgtgtctg
gtgtatgatcttgcagatttaacaacactggagaaaatcaaagaaaggtggatgccatta
atcaaggattgctcaatgcatgagtcaatgcttcccattattcttgttggaaataaatcg
gacctgatttctgactcgaaaatgtacgaagttattcctattatgaatgacttccctgag
attgagacgtgcattgaatgctcatctaaaacactgaataatgtcagtgagatgtttttc
tttgcacagaaagctgttctgtacccaacagcacctttatattccccccaggatggtgat
ttaaagccagaaagcaagatagctttggtgcgaatatttaaactgttcgacaaagacaat
gatggggtgttaaatgacgacgaactaagctacttccaaaaaatctgcttcagcactccc
cttgccatgcaggccttacaagatgttaaaaatgttgttaagaagaactgccctgatgga
atagtggatgatagcctcacatgtgatggtttcctctacctgcatctgttgtttgttcaa
agaggcagacatgaaacaacatgggctgtactgaggaaatttggatataatggtcttctc
cagattaatgaagattaccttcgtcccgatctgccgcctgctccagcagacacgatccca
cagctcacaatggatgcaagaaagttccttaatgaagttttttccaagtatgataaagat
gaagatggagcattgaatccgatggagatggacgacttgttctctgtcttcccatatgaa
ccgtggggatcagaagtcttaaatactgtatgcactaacagcaaaggctggatcacaaga
gctggatttctgtcgcagtggatgctaactacgttcattgatgctcctcgtactttggag
tacttagggtaccttggatactcggctcttctggactgcgcgtcacaggcagaggcaatt
cacttcacaacgaacagtactacgcatgccactgatgaaaataatagagatatatttaca
tgtaaagtgattggtgtcagaggcgttgggaaatctgctttcctccaggggcttctagaa
acaagtgagaatacaaagaaatccaagcacagccaagtgtctgtgttcgcagtaaatgag
gtacaagtgaaaaacctttcacctgtctatcttcttctgcatgaagttgatgtttctgac
ctccttgcagcaggagaaggttcatttctctgtgatgtagtttgcttgttgtacgattcc
actgatgccgacagttttcagtgctgtgttgaagttcacaagcagtttgtggttggctct
tccgtctcctgtattgtaattgccaccaaagctgatggtaaagccgtgaaacaaagatgt
gcgcttcagccagtggacttttgcctccaaaacagtcttccccctcccatagctttctct
tcaagacagaagagcagcacgtcagtgtatgagacaattgcagaaatggctgccgttcca
aaatcctcaactgaacatcaaacttctgcacttggaataattctaaaaataggaatcaca
accgctatacttgcaggtctgggatacggcctgtacaaatactcaaacactttcaagaaa
cctaattttttgaagtcctag
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