Ciona intestinalis (yellow sea squirt): 100186079
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Entry
100186079 CDS
T01056
Name
(RefSeq) syntaxin-16-like
KO
K08489
syntaxin 16
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100186079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186079
Membrane trafficking [BR:
cin04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
100186079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Lebercilin
ODV-E18
DUF2116
ETRAMP
Motif
Other DBs
NCBI-GeneID:
100186079
NCBI-ProteinID:
XP_009860254
Ensembl:
ENSCING00000021041
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All DBs
Position
11:complement(3508509..3511129)
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AA seq
332 aa
AA seq
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MLSRFLGFVLVKIRRVLFNMAVRSLTEAFLLMRNNSLQNKNMFTSHNTDYEEEDDRVALV
GGKKYDEESRIGFRKCLPPQWTDESHDLKYNISNIEQKMQDLSLLHDKHLHRPTLDDDVE
EEHEIEVMTLEITHLFHQCSATIKTIRKQGQTSGRDTVVVNNVVSSYAAQLQDLSTKFKK
AQSSYLKKLKHREERSHHFFSSTSVLMPEHTEDDIDDADFNKALSQDQVAIIDQNAVNIE
QRESEIRSVVQSINDLAEIFSDLGNIVVEQGTVLDRIDYNVENAVVKTETGLGELKKAEE
YQKKNRKLFVILVMAVIVIILLIILISSKSKS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcgatttttaggttttgttttagtgaagataagacgtgtgttgtttaacatg
gctgtcagatcactcactgaggcgtttctccttatgaggaataattccttgcaaaacaag
aacatgttcacaagtcataacacggattatgaagaggaggatgacagggtagctttggta
ggagggaaaaaatacgacgaagaatctcgtattggatttcgaaagtgtcttccgccacag
tggacggatgaatctcatgatttgaagtacaatatctcaaacattgaacagaagatgcag
gatttatccttgctccatgataagcatctgcatcgtcccacactggatgatgatgtagaa
gaagagcacgagatcgaagtgatgactttagaaatcactcatctctttcatcagtgcagt
gctactataaagacgatcaggaaacaaggacaaacttcaggccgagatacagtggttgta
aataatgtggtgtctagttacgcagcgcagttgcaagacctttcgactaagtttaaaaaa
gcgcaatcttcgtatctgaaaaagttgaagcacagagaggagcgctcacatcatttcttt
agctcaacatcagtccttatgccggagcacacggaggatgatatagatgatgccgacttc
aacaaagctctttcgcaagatcaggttgcaattatcgaccagaatgctgtgaatattgaa
cagcgagaaagtgaaataagatctgtagttcaaagcatcaatgatcttgctgaaattttc
tcggaccttggaaatattgtcgttgaacaagggactgtccttgaccgaattgactacaac
gtagaaaacgctgttgttaaaacggaaactggtttaggggagctgaaaaaggcagaagaa
taccagaaaaaaaatcgaaaactttttgttatcctggtaatggctgttattgtaataatt
ttgcttataattttaataagcagtaagtctaaaagctaa
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