Ciona intestinalis (yellow sea squirt): 100186140
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Entry
100186140 CDS
T01056
Name
(RefSeq) DNA repair protein RAD51 homolog 3-like isoform X1
KO
K10870
RAD51-like protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03440
Homologous recombination
cin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100186140
03460 Fanconi anemia pathway
100186140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100186140
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
100186140
FA (Fanconi anemia) pathway
Other FA pathway factors
100186140
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
DnaB_C
RecA
TALPID3
AAA_24
Motif
Other DBs
NCBI-GeneID:
100186140
NCBI-ProteinID:
XP_002130341
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Position
8:complement(2670567..2673987)
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AA seq
391 aa
AA seq
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MLKILEEILQQELSKNSQISTFSSNLDSLLGGGVKVGSITEIAGESSTGKTQLCFQLATN
AHIHTKYGGVGGETVYIDTEMTFKTERIGQIAQAMVHHFERTKHATDMSADTVLSGIYLF
RCIKMVQLLAVSYQLFEFVKSHPKVKLVIVDSIAQXXRAEEDMKIRNKLLNNLAANLRKI
ASLLNVAVVLVNQVTTRFDEYGNSCMVPALGESWSNIPHTKLFLYKLQGLRFALLTKSPT
QPRRKVNYVITSNGIRDTAHDVSYDNIINISQNTTEQLLANDHDETAAPVIKQSLVHEED
IQQQWIELSQKQLVTEDEPDIVTSQSVSSSSNQAIITSQSKGCSFNKDIMTSQTESCSTS
HDIMTSEQVQQPPSPILSRRKSRKRKRVLDN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattttggaagaaattttacagcaggaattatcaaaaaacagccaaatttca
acattttcatcgaacttggatagtcttttaggtggaggggttaaagttggcagcataacg
gaaattgccggtgaaagtagcactggaaagactcagttgtgtttccaattagctacaaat
gctcacatacacaccaagtatggtggggtgggtggggagacggtttatatcgatacagag
atgacgtttaaaactgagaggattggtcaaattgctcaagcaatggttcatcattttgaa
agaacaaagcatgcaactgacatgagtgccgatacagttttatctggaatatatttattt
cgatgcataaaaatggttcaattacttgcggtatcttatcaactatttgaatttgtgaaa
tctcacccaaaggttaagcttgtgatagtggacagcatagcacaangnntgcgggcagag
gaagatatgaaaataagaaacaaacttctaaataatcttgctgctaatttaaggaaaatc
gcaagtttgctcaatgttgctgttgtgttagttaatcaggtcacaaccagatttgacgag
tatggaaactcatgtatggttcctgctttaggtgaaagttggtctaacataccacacaca
aagttattcctgtacaaacttcaaggtctcagatttgcccttcttaccaagtcacccacc
caaccaagaagaaaagtaaattacgtgataacatcaaacggaatccgtgatacagctcat
gatgtatcatatgataacatcataaacatatcacaaaacacaactgagcagttacttgct
aatgatcatgatgaaacagctgctcccgtgataaaacaatccttagttcatgaggaagac
atacaacaacaatggattgaattgtcgcagaaacaactcgtaactgaggacgaacctgac
attgtgacatcacagtcagtgtcctcttcatccaaccaagcaattataacatcacagtca
aaaggttgttcatttaacaaagacattatgacatcacagacagaaagctgttcgaccagc
catgacattatgacatcagaacaagttcaacaacctccatctccaattctgtccagacga
aaatctcgaaaaagaaaacgagttttagataattaa
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