KEGG   Ciona intestinalis (yellow sea squirt): 100186238
Entry
100186238         CDS       T01056                                 
Name
(RefSeq) eukaryotic translation initiation factor 4E-1A
  KO
K03259  translation initiation factor 4E
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100186238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100186238
   03012 Translation factors [BR:cin03012]
    100186238
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100186238
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100186238
Translation factors [BR:cin03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100186238
SSDB
Motif
Pfam: IF4E
Other DBs
NCBI-GeneID: 100186238
NCBI-ProteinID: XP_002126987
Ensembl: ENSCING00000004199
LinkDB
Position
12:complement(4178148..4180893)
AA seq 233 aa
MSESDKSVKVSLDPGARPKSKESQEEKEVKTVSLKEDVIEEKPMGDPEDCIKHPLQNKWA
LWFFKNDRQKKWEDNLRLVTKFDTVEDFWALYNHIQLSSKLQSGCDYNLFKDGIQPMWED
KANKKGGKWMLQMSKQQRVNELDKVWLEILLCLIGEGFGEDSDYVNGGVVQVRHKGDKVA
IWTSDYKHREGIMNIGQICKTRLGLPKKAVLGFQAHEDTMSKSGSTVKTLWSV
NT seq 702 nt   +upstreamnt  +downstreamnt
atgtccgagtcggacaaatctgtgaaagtttctctcgatcctggagctcgtcccaagtcc
aaggagagccaggaggaaaaagaagtgaagactgtatccttgaaagaagatgtaatagaa
gagaaacccatgggagatccagaagattgcatcaagcatccactacaaaataaatgggcc
ttgtggtttttcaaaaatgatcgacagaagaaatgggaagacaatcttcgccttgtgaca
aagtttgatacagtggaagatttttgggcgttgtacaaccacatccagctatcaagcaaa
cttcagagcggttgcgattataatctttttaaggatggaattcaaccgatgtgggaggac
aaggcgaacaaaaaaggaggcaaatggatgctacaaatgagcaaacaacaacgtgttaat
gaacttgataaagtttggcttgaaattcttttgtgtttgattggggagggatttggagag
gattcagattacgtgaatggtggagttgtacaggttcggcataaaggtgataaagtagca
atctggacttcagattataaacatcgcgaaggaattatgaatattggacaaatttgcaaa
actagacttggacttccgaagaaagcagttctaggtttccaggcccatgaagatacaatg
agtaaatctggatcgacggttaaaacgctctggtctgtatga

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