KEGG   Ciona intestinalis (yellow sea squirt): 100186285
Entry
100186285         CDS       T01056                                 
Name
(RefSeq) target of rapamycin complex subunit lst8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04136  Autophagy - other
cin04140  Autophagy - animal
cin04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100186285
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100186285
   04136 Autophagy - other
    100186285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100186285
Membrane trafficking [BR:cin04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    100186285
   mTORC2 complex
    100186285
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_WDR75_1st TAF1C_beta-prop Beta-prop_WDR75_2nd Hira Beta-prop_NUP159_NUP214 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 100186285
NCBI-ProteinID: XP_002127133
Ensembl: ENSCING00000004488
UniProt: F6TFD0
LinkDB
Position
Unknown
AA seq 322 aa
MTVDGSSDSIILATGSYDHTIRFWQAHSGVCLRTVQHPDSQVNAMKITPDRGLLAAAGYQ
HVRMYDVKSMNPNPIRCYDGLGKNVTSVGFQQDGKWMFTGGEDCMARIWDMRARSIQCNR
MFQVNAPITSACLHPNQGELIVADQSGCINIWDLKSDKTERLIPEPDVAINCIDIDADAS
YLAAVNTEGSCFVWSVSQRKSLEGVIQVNPRAKLKAHSRYALKCKFSPDSVLLATTSADQ
SVKVWQTSHFQHLSTLKLCNTDPADPPHGWMWDCEFSADSQFIITASSDCVARLWNIETA
EVKREYSGHSKAVVSLAFSDST
NT seq 969 nt   +upstreamnt  +downstreamnt
atgaccgtcgatggcagcagtgactctattatactagctacgggaagctatgatcatacc
atacggttctggcaagctcatagcggggtttgtttacgaacagttcaacacccagattcg
caagtaaacgcaatgaagattacaccagatcggggattgcttgcagctgcagggtatcaa
catgtcagaatgtacgacgtaaagtcaatgaatccgaacccgatcagatgttacgatggt
ttggggaagaacgtgacgtcagttggattccaacaagacgggaagtggatgtttaccggg
ggggaagactgcatggcaaggatatgggacatgagagctcgaagcatccaatgcaaccga
atgttccaagttaacgcacccattacctcagcgtgcttacatcctaaccagggtgaactg
attgtggccgaccaaagtggttgtatcaatatatgggatctaaagtcggataaaacagaa
cgtctgattcctgaaccagacgttgcaatcaactgcattgacatcgatgcagatgcaagc
tacttggctgctgtcaatactgaaggttcatgttttgtatggagtgtttctcaacgcaag
tcattggaaggcgtgatacaagtgaacccacgtgccaaactaaaagctcattcacgatac
gccttgaagtgcaagtttagtccagactccgtactcctcgcaacgacatcggccgaccag
tctgtcaaagtttggcaaacctctcacttccagcatctatccacactaaagttatgcaac
accgaccctgcggaccccccacacggttggatgtgggattgtgaattctcagctgactcc
cagtttataataacagcatcatcggactgtgttgctcgactgtggaacatagaaacagca
gaagtgaagagggaatatagtggccactcgaaggcggtagtgagcttggcgttcagcgat
tccacgtga

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